RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Ntmt1Q8R2U4 223 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ammecr1Q9JHT5 344 aaKnown RBP10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm6890A2BG94 208 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Cypt3B1AY64 174 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Zfp229E9PWT2 705 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ifna14Q810G3 189 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr829Q8VGX1 321 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ucn3Q924A4 164 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Vma21-psA0A140T8R2 101 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm4175D3YTW8 314 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Npffr1E9Q468 432 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm5426J3QNM7 103 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Vmn1r114L7N226 321 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Vmn1r126L7N2C8 321 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 MgpP19788 104 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ascl1Q02067 231 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Foxk2Q3UCQ1 651 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Nkain2Q4PNJ2 208 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Serinc4Q5XK03 492 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1286Q7TQY2 305 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1282Q7TQY5 305 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1445Q8VFW9 314 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1201Q8VGF5 307 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Kcnmb2Q9CZM9 235 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Fbxo24Q9D417 589 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 SigirrQ9JLZ8 409 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr544E9PX47 334 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Zfp1P08042 402 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr987Q7TRA2 309 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Trmt61aQ80XC2 290 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr124Q8VGW6 315 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Anapc16Q9CPV2 110 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr545Q9WU94 316 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tnrc6cQ3UHC0 1690 aaKnown RBP10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tmem211Q3UUA0 195 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr638Q8VH20 321 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Rep15Q9D7T1 230 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Dock8Q8C147 2100 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Igk-V19-17P01633 149 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 ThbdP15306 577 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Nkx3-1P97436 237 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 TepsinQ3U3N6 573 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Cyb561a3Q6P1H1 242 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Megf11Q80T91 1091 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Dusp22Q99N11 184 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Msgn1Q9JK54 188 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Slc25a20Q9Z2Z6 301 aaKnown RBP10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Fer1l5P0DM40 2038 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 H2-M10.1O19443 331 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Mc5rP41149 325 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Lrrtm3Q8BZ81 582 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Spsb1Q9D5L7 273 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Izumo1rQ9EQF4 244 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Dock10Q8BZN6 2150 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Psme4Q5SSW2 1843 aa10.7□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm13283A0A087WPG5 182 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Zfp688E9Q5M9 274 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 CrpP14847 225 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 SnrpeP62305 92 aaKnown RBP10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tmem184aQ3UFJ6 425 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Rps27Q6ZWU9 84 aaKnown RBP10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Henmt1Q8CAE2 395 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ccl27Q9Z1X0 120 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Nipsnap1O55125 284 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Plk3Q60806 631 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 MdficQ8BX65 247 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ccdc187Q8C5V8 958 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 MrgpreQ91ZB7 310 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Fzd2Q9JIP6 570 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Sned1Q70E20 1403 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Vmn1r7E9Q8T0 311 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm16519F8VQK7 162 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 P01878 344 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 BckdhbQ6P3A8 390 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 BtlaQ7TSA3 306 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Slamf7Q8BHK6 333 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Muc20Q8BUE7 656 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1448Q8VFX1 314 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Wdr4Q9EP82 413 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Vmn1r47Q9EQ51 310 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 DeddQ9Z1L3 318 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 P04214 136 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Pafah1b3Q61205 232 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Cd209aQ91ZX1 238 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Rnps1Q99M28 305 aaKnown RBP10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 1700020A23RikQ9DA59 131 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Lrrc29A0A1B0GQY9 621 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1314A2AVL6 312 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 RhodP97348 210 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Slc25a33Q3TZX3 320 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Fbxw26Q8BI58 466 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr215Q8VF82 310 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Stard4Q99JV5 224 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Atpaf1Q811I0 324 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Rpl24Q8BP67 157 aaKnown RBP10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Mob3aQ8BSU7 217 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1269Q8VEZ2 309 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1265Q8VEZ3 309 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Arrdc1Q99KN1 434 aa10.69□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tspan31Q9CQ88 210 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms