RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 IKZF1Q13422 519 aa4.94□□□□□ -1.62
RTTN-218ENST00000640408 PHLDA2Q53GA4 152 aa4.94□□□□□ -1.62
RTTN-218ENST00000640408 LDLRAD2Q5SZI1 272 aa4.94□□□□□ -1.62
RTTN-218ENST00000640408 RNASE6Q93091 150 aaKnown RBP4.94□□□□□ -1.62
RTTN-218ENST00000640408 TMEM208Q9BTX3 173 aa4.94□□□□□ -1.62
RTTN-218ENST00000640408 CHST5Q9GZS9 411 aa4.94□□□□□ -1.62
RTTN-218ENST00000640408 WDR13Q9H1Z4 485 aa4.94□□□□□ -1.62
RTTN-218ENST00000640408 ZNF835Q9Y2P0 537 aa4.94□□□□□ -1.62
RTTN-218ENST00000640408 PKD1L2Q7Z442 2459 aa4.94□□□□□ -1.62
RTTN-218ENST00000640408 TNRC6BQ9UPQ9 1833 aaKnown RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 OR5AL1P0C617 328 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 G6PCP35575 357 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 SRSF6Q13247 344 aaKnown RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 NRN1LQ496H8 165 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 FNDC7Q5VTL7 733 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 FAM169BQ8N8A8 192 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 OR52N4Q8NGI2 321 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 OR5A1Q8NGJ0 315 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 SH2D2AQ9NP31 389 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 HINT3Q9NQE9 182 aaKnown RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 ZNF391Q9UJN7 358 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 MED13Q9UHV7 2174 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 FASNP49327 2511 aaKnown RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 IGHA1P01876 353 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 CD79AP11912 226 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 SELEP16581 610 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 BTF3P20290 206 aaKnown RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 CD1BP29016 333 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 SLC25A1P53007 311 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 GUCA2AQ02747 115 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 PRSS53Q2L4Q9 553 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 GLIPR1L1Q6UWM5 242 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 TMEM136Q6ZRR5 245 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 FAM222BQ8WU58 562 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 C11orf40Q8WZ69 217 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 ADAT3Q96EY9 351 aaPredicted RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 TAS2R4Q9NYW5 299 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 PSENENQ9NZ42 101 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 SNCGO76070 127 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 MT-ND6P03923 174 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 TDGF1P3P51864 188 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 FUT5Q11128 374 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 MPV17LQ2QL34 196 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 OLIG3Q7RTU3 272 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 OR10G8Q8NGN5 311 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 TMEM255BQ8WV15 326 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 WDYHV1Q96HA8 205 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 DERL3Q96Q80 235 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 NMNAT3Q96T66 252 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 LPAR5Q9H1C0 372 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 SRD5A3Q9H8P0 318 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 ZMAT3Q9HA38 289 aaKnown RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 JKAMPQ9P055 326 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 LAMTOR2Q9Y2Q5 125 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 INTS1Q8N201 2190 aaKnown RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 ABCA4P78363 2273 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 MBD3L4A6NDZ8 208 aaPredicted RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 MBD3L3A6NE82 208 aaPredicted RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 MBD3L5A6NJ08 208 aaPredicted RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 A6NNC1 897 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 SLC25A17O43808 307 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 CLDN14O95500 239 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 LCATP04180 440 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 EMP1P54849 157 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 LSM6P62312 80 aaKnown RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 TBC1D28Q2M2D7 210 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 MBD3L2Q8NHZ7 208 aaPredicted RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 ROBO4Q8WZ75 1007 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 FOXB1Q99853 325 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 PSMG3Q9BT73 122 aaPredicted RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 HES7Q9BYE0 225 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 DEPPQ9NTK1 212 aa4.93□□□□□ -1.62
RTTN-218ENST00000640408 SOX21Q9Y651 276 aaPredicted RBP4.93□□□□□ -1.62
RTTN-218ENST00000640408 ANKHD1Q8IWZ3 2542 aaKnown RBP4.92□□□□□ -1.62
RTTN-218ENST00000640408 J3QW42 95 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 SLC17A2O00624 439 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 PLPP3O14495 311 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 CD3EP07766 207 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 CTXN2P0C2S0 81 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 IL11P20809 199 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 EFNB1P98172 346 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 C6orf201Q7Z4U5 140 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 HSD17B8Q92506 261 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 EGLN1Q9GZT9 426 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 PARLQ9H300 379 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 FLRT3Q9NZU0 649 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 SIGLEC7Q9Y286 467 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 ZNF407Q9C0G0 2248 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 IGKV3D-15A0A087WSY6 115 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 PRSS37A4D1T9 235 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 TMEM229AB2RXF0 380 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 XRCC2O43543 280 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 NPIPB7O75200 414 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 GYPAP02724 150 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 CLPSP04118 112 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 PGA3P0DJD8 388 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 SELLP14151 372 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 UBE2V1Q13404 147 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 C3AR1Q16581 482 aa4.92□□□□□ -1.62
RTTN-218ENST00000640408 CEACAM16Q2WEN9 425 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms