RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 FOXRED2Q8IWF2 684 aa10.95□□□□□ -0.66
PNKP-228ENST00000637325 CHPT1Q8WUD6 406 aa10.95□□□□□ -0.66
PNKP-228ENST00000637325 YPEL2Q96QA6 119 aa10.95□□□□□ -0.66
PNKP-228ENST00000637325 RASL11BQ9BPW5 248 aa10.95□□□□□ -0.66
PNKP-228ENST00000637325 STEAP1Q9UHE8 339 aa10.95□□□□□ -0.66
PNKP-228ENST00000637325 AK3Q9UIJ7 227 aa10.95□□□□□ -0.66
PNKP-228ENST00000637325 LANCL1O43813 399 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 NAPSAO96009 420 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 SLC35B1P78383 322 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 LY6G6FQ5SQ64 297 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 C10orf99Q6UWK7 81 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 FAM89BQ8N5H3 189 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 OR2AK2Q8NG84 335 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 OR56B1Q8NGI3 324 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 NOL4LQ96MY1 436 aaPredicted RBP10.94□□□□□ -0.66
PNKP-228ENST00000637325 NDUFB11Q9NX14 153 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 RAB22AQ9UL26 194 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 HSF4Q9ULV5 492 aa10.94□□□□□ -0.66
PNKP-228ENST00000637325 TRAV1-2A0A0B4J238 106 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 TRDV1A0A1B0GX56 115 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 ZNF736B4DX44 427 aaPredicted RBP10.93□□□□□ -0.66
PNKP-228ENST00000637325 G3V4G9 280 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 DENRO43583 198 aaKnown RBP10.93□□□□□ -0.66
PNKP-228ENST00000637325 IGHG2P01859 326 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 PF4P02776 101 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 PSMB9P28065 219 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 MRPS15P82914 257 aaKnown RBP10.93□□□□□ -0.66
PNKP-228ENST00000637325 TCTEX1D4Q5JR98 221 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 ZNF880Q6PDB4 577 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 ZNF329Q86UD4 541 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 Q8N6K4 173 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 OR8H1Q8NGG4 311 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 ARHGAP5-AS1Q96IT6 56 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 S1PR3Q99500 378 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 CMSS1Q9BQ75 279 aaKnown RBP10.93□□□□□ -0.66
PNKP-228ENST00000637325 HDHD3Q9BSH5 251 aaPredicted RBP10.93□□□□□ -0.66
PNKP-228ENST00000637325 YTHDF1Q9BYJ9 559 aaKnown RBP10.93□□□□□ -0.66
PNKP-228ENST00000637325 LIN7CQ9NUP9 197 aaKnown RBP10.93□□□□□ -0.66
PNKP-228ENST00000637325 LINC00527Q9UJ94 153 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 MGAT4AQ9UM21 535 aa10.93□□□□□ -0.66
PNKP-228ENST00000637325 TRBV6-6A0A0A6YYG2 114 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 TMEM272A0A1B0GTI8 110 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 HSPA12AO43301 675 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 CD33P20138 364 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 RAB3BP20337 219 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 OR10A3P58181 314 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 LSAMPQ13449 338 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 C22orf42Q6IC83 251 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 SPARTQ8N0X7 666 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 Q8N9W7 124 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 FCGR1BQ92637 280 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 PECRQ9BY49 303 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 MRPL20Q9BYC9 149 aaKnown RBP10.92□□□□□ -0.66
PNKP-228ENST00000637325 ABCG5Q9H222 651 aa10.92□□□□□ -0.66
PNKP-228ENST00000637325 AP4M1O00189 453 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 ST8SIA5O15466 376 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 CD3GP09693 182 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 GALP22466 123 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 ZBTB25P24278 435 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 GPR12P47775 334 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 OR3A3P47888 321 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 F2RL1P55085 397 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 TMEM50BP56557 158 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 HLA-DRB3P79483 266 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 UBE2UQ5VVX9 321 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 CD200R1LQ6Q8B3 271 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 ODF3L1Q8IXM7 274 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 STPG2Q8N412 459 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 GON7Q9BXV9 100 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 Q9N2K0 584 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 C12orf4Q9NQ89 552 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 PLSCR3Q9NRY6 295 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 PIPOXQ9P0Z9 390 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 SLC23A1Q9UHI7 598 aa10.91□□□□□ -0.66
PNKP-228ENST00000637325 SAA2-SAA4A0A096LPE2 208 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 LINC01548A6NM66 108 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 IFITM5A6NNB3 132 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 FOXI3A8MTJ6 420 aaPredicted RBP10.9□□□□□ -0.66
PNKP-228ENST00000637325 RAB29O14966 203 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 LDLRAD4O15165 306 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 RRP9O43818 475 aaKnown RBP10.9□□□□□ -0.66
PNKP-228ENST00000637325 SAA2P0DJI9 122 aaPredicted RBP10.9□□□□□ -0.66
PNKP-228ENST00000637325 GADD45AP24522 165 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 SOX6P35712 828 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 CEACAM6P40199 344 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 MMDQ15546 238 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 PLAC9Q5JTB6 97 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 SAMD5Q5TGI4 173 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 Q6ZPA2 131 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 ZNF833PQ6ZTB9 187 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 COMMD1Q8N668 190 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 EDARADDQ8WWZ3 215 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 RAB3CQ96E17 227 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 NABP2Q9BQ15 211 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 ZNF251Q9BRH9 671 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 ZFP57Q9NU63 452 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 SSR3Q9UNL2 185 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 TGP01266 2768 aa10.9□□□□□ -0.66
PNKP-228ENST00000637325 PRKDCP78527 4128 aaKnown RBP10.9□□□□□ -0.67
PNKP-228ENST00000637325 A0A075B6Q4 140 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms