RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ELOA3CA0A087WX78 387 aaPredicted RBP13.12□□□□□ -0.31
CLN8-209ENST00000635970 ZNF503-AS2A6NEH8 195 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 ZNF732B4DXR9 585 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 H3BQ15 152 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 DHHO43323 396 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 XRCC2O43543 280 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 HOXC12P31275 282 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 SLC35E3Q7Z769 313 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 CYYR1Q96J86 154 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 SLC25A15Q9Y619 301 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 A6NNC1 897 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 DEFB108AA8MXU0 73 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 CRYGSP22914 178 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 PPP1CCP36873 323 aaKnown RBP13.12□□□□□ -0.31
CLN8-209ENST00000635970 RBP2P50120 134 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 HERV-K104P61576 105 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 SRSF7Q16629 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLN8-209ENST00000635970 RSPO1Q2MKA7 263 aaPredicted RBP13.12□□□□□ -0.31
CLN8-209ENST00000635970 OR2B11Q5JQS5 317 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 CLEC9AQ6UXN8 241 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 C17orf78Q8N4C9 275 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 NABP1Q96AH0 204 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 TVP23CQ96ET8 276 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 TECTBQ96PL2 329 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 BCL2L14Q9BZR8 327 aa13.12□□□□□ -0.31
CLN8-209ENST00000635970 TRDCB7Z8K6 153 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 PHF1O43189 567 aaPredicted RBP13.11□□□□□ -0.31
CLN8-209ENST00000635970 SRP19P09132 144 aaKnown RBP13.11□□□□□ -0.31
CLN8-209ENST00000635970 ATP6V0CP27449 155 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 TAGLN2P37802 199 aaKnown RBP13.11□□□□□ -0.31
CLN8-209ENST00000635970 NKX2-1P43699 371 aaPredicted RBP13.11□□□□□ -0.31
CLN8-209ENST00000635970 UBE2KP61086 200 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 TLE4Q04727 773 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 TAF9Q16594 264 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 ZNF506Q5JVG8 444 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 NCMAPQ5T1S8 102 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 SPSB3Q6PJ21 355 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 SGK3Q96BR1 496 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 TMEM56Q96MV1 263 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 NIPSNAP3BQ9BS92 247 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 LYRM2Q9NU23 88 aaPredicted RBP13.11□□□□□ -0.31
CLN8-209ENST00000635970 TMEM38BQ9NVV0 291 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 TMEM56-RWDD3S4R434 201 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 APCP25054 2843 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 C3orf85A0A1B0GTC6 90 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.11□□□□□ -0.31
CLN8-209ENST00000635970 C5orf63A6NC05 138 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 HSD17B6O14756 317 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 MPPED1O15442 326 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 FXYD4P59646 89 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 RND3P61587 244 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 ELOBQ15370 118 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 KHDC3LQ587J8 217 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 FAM27BQ5VT28 67 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 SLC22A25Q6T423 547 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 Q6ZS49 121 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 OSR2Q8N2R0 312 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 SLC35G3Q8N808 338 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 RAB39BQ96DA2 213 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 BORCS8Q96FH0 119 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 TMEM222Q9H0R3 208 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 TMEM242Q9NWH2 141 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 PLEK2Q9NYT0 353 aa13.11□□□□□ -0.31
CLN8-209ENST00000635970 HLA-HP01893 362 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 PATE4P0C8F1 98 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 ZNF83P51522 516 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 MRPS34P82930 218 aaKnown RBP13.1□□□□□ -0.31
CLN8-209ENST00000635970 MALLQ13021 153 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 DAZAP2Q15038 168 aaPredicted RBP13.1□□□□□ -0.31
CLN8-209ENST00000635970 OR8G1Q15617 311 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 PHLDA2Q53GA4 152 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 OR5L1Q8NGL2 311 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 PLPPR2Q96GM1 343 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 PFDN5Q99471 154 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 RARRES2Q99969 163 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 GPR173Q9NS66 373 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 DOK5Q9P104 306 aa13.1□□□□□ -0.31
CLN8-209ENST00000635970 A0A1W2PPR1 153 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 PDCD6O75340 191 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 HAAOP46952 286 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 GLIPR1P48060 266 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 UBE2NP61088 152 aaKnown RBP13.09□□□□□ -0.31
CLN8-209ENST00000635970 SSTP61278 116 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 VAMP2P63027 116 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 PNRC1Q12796 327 aaPredicted RBP13.09□□□□□ -0.31
CLN8-209ENST00000635970 RAB35Q15286 201 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 TMEM42Q69YG0 159 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 ZNF429Q86V71 674 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 OR10AD1Q8NGE0 317 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 AKR7LQ8NHP1 331 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 FGFBP3Q8TAT2 258 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 CACNA1DQ01668 2161 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 ABCA12Q86UK0 2595 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 ITPR2Q14571 2701 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 ABCA4P78363 2273 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 TRAV1-1A0A0B4J248 108 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 LOXP28300 417 aaPredicted RBP13.09□□□□□ -0.31
CLN8-209ENST00000635970 KRTAP10-9P60411 292 aa13.09□□□□□ -0.31
CLN8-209ENST00000635970 DEFA6Q01524 100 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms