RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 KCNAB3O43448 404 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 IL13RA2Q14627 380 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 CLEC18BQ6UXF7 455 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 TPRX1Q8N7U7 411 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 BVESQ8NE79 360 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 SPSB4Q96A44 273 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 PHYHIPLQ96FC7 376 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 MPTX1A8MV57 137 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 IFNL4K9M1U5 179 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 TOR1AO14656 332 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 IFNA5P01569 189 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 PMELP40967 661 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 FGF12P61328 243 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 ARSJQ5FYB0 599 aaPredicted RBP10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 ELP2Q6IA86 826 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 RHOFQ9HBH0 211 aa10.49□□□□□ -0.73
SYNGAP1-207ENST00000628646 OOEPA6NGQ2 149 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 NUDT19A8MXV4 375 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 GPR31O00270 319 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 LYL1P12980 280 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 CATR1Q13166 79 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 SPAG16Q8N0X2 631 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 ZNF75AQ96N20 296 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 NAA60Q9H7X0 242 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 SLC25A10Q9UBX3 287 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 TMED3Q9Y3Q3 217 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 E5RGE8 158 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 RPL23AP62750 156 aaKnown RBP10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 COL10A1Q03692 680 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 FAM76BQ5HYJ3 339 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 OR5D13Q8NGL4 314 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 HPSE2Q8WWQ2 592 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 NSG2Q9Y328 171 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 TRAV39A0A0B4J263 110 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 TMEM30CPA0ZSE6 113 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 MLNRO43193 412 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 PRSS54Q6PEW0 395 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 HSD17B13Q7Z5P4 300 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 LIME1Q9H400 295 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 PLEKHF2Q9H8W4 249 aa10.48□□□□□ -0.73
SYNGAP1-207ENST00000628646 A0A1W2PRD5 423 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 A0A1W2PRF3 423 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 A0A1W2PRM7 423 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 NDUFS7O75251 213 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 CAV2P51636 162 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 ANKRD55Q3KP44 614 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 BTNL3Q6UXE8 466 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 Q6ZPA2 131 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 BAP18Q8IXM2 172 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 SCGB1C1Q8TD33 95 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 F8VVB4 439 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 F8VWA3 439 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 JTBO76095 146 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 FCGR3AP08637 254 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 CHATP28329 748 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 DEFA5Q01523 94 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 MSMO1Q15800 293 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 TMEM42Q69YG0 159 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 ZNF525Q8N782 197 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 CYTL1Q9NRR1 136 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 TMEM33P57088 247 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 ASCL4Q6XD76 172 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 MRGPRDQ8TDS7 321 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 PRR13Q9NZ81 148 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 RPL31P62899 125 aaKnown RBP10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 AESQ08117 197 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 FAM74A1Q5RGS3 127 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 STX12Q86Y82 276 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 GCM1Q9NP62 436 aa10.47□□□□□ -0.73
SYNGAP1-207ENST00000628646 hADV38S2A0JD32 116 aa10.46□□□□□ -0.73
SYNGAP1-207ENST00000628646 IGHV3-7P01780 117 aa10.46□□□□□ -0.73
SYNGAP1-207ENST00000628646 IL24Q13007 206 aa10.46□□□□□ -0.73
SYNGAP1-207ENST00000628646 CLEC12BQ2HXU8 276 aa10.46□□□□□ -0.73
SYNGAP1-207ENST00000628646 ZNRF1Q8ND25 227 aa10.46□□□□□ -0.73
SYNGAP1-207ENST00000628646 FAM212BQ9NTI7 297 aaPredicted RBP10.46□□□□□ -0.73
SYNGAP1-207ENST00000628646 CFAP47Q6ZTR5 3102 aa10.46□□□□□ -0.73
SYNGAP1-207ENST00000628646 TRDCB7Z8K6 153 aa10.46□□□□□ -0.74
SYNGAP1-207ENST00000628646 RNF224P0DH78 156 aa10.46□□□□□ -0.74
SYNGAP1-207ENST00000628646 COX7A1P24310 79 aa10.46□□□□□ -0.74
SYNGAP1-207ENST00000628646 COL8A2P25067 703 aa10.46□□□□□ -0.74
SYNGAP1-207ENST00000628646 OR51I2Q9H344 312 aa10.46□□□□□ -0.74
SYNGAP1-207ENST00000628646 MTCH1Q9NZJ7 389 aa10.46□□□□□ -0.74
SYNGAP1-207ENST00000628646 TSPAN9O75954 239 aa10.46□□□□□ -0.74
SYNGAP1-207ENST00000628646 NKX2-1P43699 371 aaPredicted RBP10.46□□□□□ -0.74
SYNGAP1-207ENST00000628646 WDR82Q6UXN9 313 aa10.46□□□□□ -0.74
SYNGAP1-207ENST00000628646 Q6ZR03 302 aa10.46□□□□□ -0.74
SYNGAP1-207ENST00000628646 PQLC2LA1A4F0 135 aa10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 NDUFA2O43678 99 aa10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 RPL12P30050 165 aaKnown RBP10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 SRP14P37108 136 aaKnown RBP10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 CD200P41217 278 aa10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 DYRK2Q92630 601 aa10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 PCGF1Q9BSM1 259 aa10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 ZNF705EA8MWA4 302 aaPredicted RBP10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 OR2H2O95918 312 aa10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 TMEM268Q5VZI3 342 aa10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 FAM216BQ8N7L0 139 aa10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 SULT4A1Q9BR01 284 aa10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 MS4A7Q9GZW8 240 aaPredicted RBP10.45□□□□□ -0.74
SYNGAP1-207ENST00000628646 MIOXQ9UGB7 285 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms