RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ZNRD1Q9P1U0 126 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 CLDN34H7C241 214 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 TRIM77I1YAP6 450 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 YPEL1O60688 119 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 FCER2P06734 321 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 ZBTB25P24278 435 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 IL3RAP26951 378 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 CEACAM3P40198 252 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 ARPC4P59998 168 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 IL18Q14116 193 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 HERPUD1Q15011 391 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 MORN2Q502X0 79 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 RNASE12Q5GAN4 147 aaKnown RBP11.92□□□□□ -0.5
PNKP-221ENST00000627317 HOGA1Q86XE5 327 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 GVQW1Q8N7I0 195 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 C8orf31Q8N9H6 132 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 BEST4Q8NFU0 473 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 OR2AK2Q8NG84 335 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 C17orf50Q8WW18 174 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 YPEL2Q96QA6 119 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 GINS4Q9BRT9 223 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 ABHD14AQ9BUJ0 271 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 OR1A1Q9P1Q5 309 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 DPM3Q9P2X0 92 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 RABL2AQ9UBK7 228 aaPredicted RBP11.92□□□□□ -0.5
PNKP-221ENST00000627317 RABL2BQ9UNT1 228 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 NBEAL1Q6ZS30 2694 aa11.92□□□□□ -0.5
PNKP-221ENST00000627317 IGKV1D-8A0A087WSZ0 117 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 IGKV1-6A0A0C4DH72 117 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 TMEM89A2RUT3 159 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 LEUTXA8MZ59 168 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 BUB1B-PAK6H3BSN5 160 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 SULT1C2O00338 296 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 DIRAS3O95661 229 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 TNFSF8P32971 234 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 CEACAM6P40199 344 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 SSX2Q16385 188 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 IGSF11Q5DX21 431 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 PYHIN1Q6K0P9 492 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 SLC25A48Q6ZT89 311 aaKnown RBP11.91□□□□□ -0.5
PNKP-221ENST00000627317 LINC00311Q8N616 119 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 ZNF439Q8NDP4 499 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 OR10J5Q8NHC4 309 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 GPX8Q8TED1 209 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 EDARADDQ8WWZ3 215 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 MALSU1Q96EH3 234 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 ANXA10Q9UJ72 324 aa11.91□□□□□ -0.5
PNKP-221ENST00000627317 SLC31A2O15432 143 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.5
PNKP-221ENST00000627317 CTXN2P0C2S0 81 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 RCVRNP35243 200 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 ARHGDIBP52566 201 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 MRPS10P82664 201 aaKnown RBP11.9□□□□□ -0.5
PNKP-221ENST00000627317 PLA1AQ53H76 456 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 CT45A1Q5HYN5 189 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 LY6G6FQ5SQ64 297 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 LDLRAD2Q5SZI1 272 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 TPTE2P1Q5T6R2 138 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 FAM131AQ6UXB0 335 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 CT45A3Q8NHU0 189 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 TOMM40LQ969M1 308 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 RPEQ96AT9 228 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 ABHD1Q96SE0 405 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 HILPDAQ9Y5L2 63 aa11.9□□□□□ -0.5
PNKP-221ENST00000627317 TRBV6-7A0A0A0MS04 114 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 BTBD17A6NE02 478 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 FABP12A6NFH5 140 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 PAX6P26367 422 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 RAB7AP51149 207 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 BAMBIQ13145 260 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 SLC9A3R2Q15599 337 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 LRRC75BQ2VPJ9 315 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 CNPY1Q3B7I2 92 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 CCDC144NLQ6NUI1 221 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 LDLRAD3Q86YD5 345 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 LYG1Q8N1E2 194 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 OR52I2Q8NH67 350 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 SSMEM1Q8WWF3 244 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 SNAPC3Q92966 411 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 AJUBAQ96IF1 538 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 DUX5Q96PT3 197 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 PARP12Q9H0J9 701 aaKnown RBP11.89□□□□□ -0.51
PNKP-221ENST00000627317 ABCB10Q9NRK6 738 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 NECAP2Q9NVZ3 263 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 RDH8Q9NYR8 311 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 ANAPC10Q9UM13 185 aa11.89□□□□□ -0.51
PNKP-221ENST00000627317 OOSP1A8MZH6 123 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 GABARAPH6UMI1 98 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 ITGB1BP1O14713 200 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 ST8SIA5O15466 376 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 ZNF134P52741 427 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 TAS2R46P59540 309 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 ACTBP60709 375 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 ACTG1P63261 375 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 DGCR2P98153 550 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 SPANXN2Q5MJ10 180 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 Q6YL49 198 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 DYNAPQ8N1N2 210 aa11.88□□□□□ -0.51
PNKP-221ENST00000627317 OR6Q1Q8NGQ2 317 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms