RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 HERPUD1Q15011 391 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 MOGAT2Q3SYC2 334 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 PRR31Q5SQ13 230 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 SFXN4Q6P4A7 337 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 Q6ZPA2 131 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 TGIF2LXQ8IUE1 241 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 LYG1Q8N1E2 194 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 YIPF6Q96EC8 236 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 ABHD14AQ9BUJ0 271 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 GHITMQ9H3K2 345 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 RNF167Q9H6Y7 350 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 SERTAD4Q9NUC0 356 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 KCNK7Q9Y2U2 307 aa13.37□□□□□ -0.27
UBE3D-208ENST00000626828 SERPINE3A8MV23 424 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 TRDCB7Z8K6 153 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 LANCL1O43813 399 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 AIREO43918 545 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 CLEC2LP0C7M8 214 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 VSIG10L2P0DP72 767 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 TMEM11P17152 192 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 ZBTB25P24278 435 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 SCAND1P57086 179 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 HNF4GQ14541 408 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 GNMTQ14749 295 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 Q6ZS46 218 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 KLHDC1Q8N7A1 406 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 OR2AK2Q8NG84 335 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 OR2T10Q8NGZ9 312 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 FBN3Q75N90 2809 aa13.36□□□□□ -0.27
UBE3D-208ENST00000626828 M0QZ24 198 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 ITGB1BP1O14713 200 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 HSPA12AO43301 675 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 SCGNO76038 276 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 IGKV1D-33P01593 117 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 IGKV1-33P01594 117 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 SCTP09683 121 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 SNRPBP14678 240 aaKnown RBP13.35□□□□□ -0.27
UBE3D-208ENST00000626828 HIST1H1DP16402 221 aaKnown RBP13.35□□□□□ -0.27
UBE3D-208ENST00000626828 GNB3P16520 340 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 TALDO1P37837 337 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 CEACAM6P40199 344 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 HLA-DRB3P79483 266 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 CDNFQ49AH0 187 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 ABCA11PQ4W5N1 156 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 CROCCP3Q8IVE0 287 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 EAF1Q96JC9 268 aaPredicted RBP13.35□□□□□ -0.27
UBE3D-208ENST00000626828 MOB4Q9Y3A3 225 aa13.35□□□□□ -0.27
UBE3D-208ENST00000626828 A0A075B6Q4 140 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 IGHV3-72A0A0B4J1Y9 119 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 MFNGO00587 321 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 FGF16O43320 207 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 AMY1AP04745 511 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 AMY2AP04746 511 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 VDAC2P45880 294 aaPredicted RBP13.34□□□□□ -0.27
UBE3D-208ENST00000626828 ARFRP1Q13795 201 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 KIR2DS1Q14954 304 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 FBLN7Q53RD9 439 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 IDNKQ5T6J7 187 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 IZUMO1Q8IYV9 350 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 EDARADDQ8WWZ3 215 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 WNT10AQ9GZT5 417 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.34□□□□□ -0.27
UBE3D-208ENST00000626828 PIPOXQ9P0Z9 390 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 SLC23A1Q9UHI7 598 aa13.34□□□□□ -0.27
UBE3D-208ENST00000626828 PKD1L1Q8TDX9 2849 aa13.33□□□□□ -0.28
UBE3D-208ENST00000626828 RAB29O14966 203 aa13.33□□□□□ -0.28
UBE3D-208ENST00000626828 MOSP00540 346 aa13.33□□□□□ -0.28
UBE3D-208ENST00000626828 SERPINB10P48595 397 aa13.33□□□□□ -0.28
UBE3D-208ENST00000626828 SRSF7Q16629 238 aaKnown RBP eCLIP13.33□□□□□ -0.28
UBE3D-208ENST00000626828 ODF3L1Q8IXM7 274 aa13.33□□□□□ -0.28
UBE3D-208ENST00000626828 OR4A4PQ8NGN8 299 aa13.33□□□□□ -0.28
UBE3D-208ENST00000626828 PHF21AQ96BD5 680 aa13.33□□□□□ -0.28
UBE3D-208ENST00000626828 S1PR3Q99500 378 aa13.33□□□□□ -0.28
UBE3D-208ENST00000626828 ETV7Q9Y603 341 aa13.33□□□□□ -0.28
UBE3D-208ENST00000626828 TET2Q6N021 2002 aaPredicted RBP13.32□□□□□ -0.28
UBE3D-208ENST00000626828 NCBP2LA6PVI3 153 aaKnown RBP13.32□□□□□ -0.28
UBE3D-208ENST00000626828 FABP7O15540 132 aa13.32□□□□□ -0.28
UBE3D-208ENST00000626828 FCGR3AP08637 254 aa13.32□□□□□ -0.28
UBE3D-208ENST00000626828 RPS19P39019 145 aaKnown RBP13.32□□□□□ -0.28
UBE3D-208ENST00000626828 PITPNAQ00169 270 aa13.32□□□□□ -0.28
UBE3D-208ENST00000626828 C9orf152Q5JTZ5 239 aa13.32□□□□□ -0.28
UBE3D-208ENST00000626828 ZNF833PQ6ZTB9 187 aa13.32□□□□□ -0.28
UBE3D-208ENST00000626828 CENPVQ7Z7K6 275 aaPredicted RBP13.32□□□□□ -0.28
UBE3D-208ENST00000626828 Q8N6K4 173 aa13.32□□□□□ -0.28
UBE3D-208ENST00000626828 OR8H1Q8NGG4 311 aa13.32□□□□□ -0.28
UBE3D-208ENST00000626828 LGALS14Q8TCE9 139 aa13.32□□□□□ -0.28
UBE3D-208ENST00000626828 C11orf54Q9H0W9 315 aaPredicted RBP13.32□□□□□ -0.28
UBE3D-208ENST00000626828 RHBDL2Q9NX52 303 aa13.32□□□□□ -0.28
UBE3D-208ENST00000626828 ZNF736B4DX44 427 aaPredicted RBP13.31□□□□□ -0.28
UBE3D-208ENST00000626828 ST8SIA5O15466 376 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 DIRAS3O95661 229 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 GSTP1P09211 210 aaKnown RBP13.31□□□□□ -0.28
UBE3D-208ENST00000626828 GSTT2P0CG29 244 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 GSTT2BP0CG30 244 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 OR3A3P47888 321 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 LSM3P62310 102 aaKnown RBP13.31□□□□□ -0.28
UBE3D-208ENST00000626828 PNLIPRP3Q17RR3 467 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 HACD4Q5VWC8 232 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 FAM71F2Q6NXP2 309 aa13.31□□□□□ -0.28
UBE3D-208ENST00000626828 TREML4Q6UXN2 200 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms