RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ZNF439Q8NDP4 499 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 OR10J5Q8NHC4 309 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 MCFD2Q8NI22 146 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 DGCR14Q96DF8 476 aaKnown RBP10.73□□□□□ -0.69
MDC1-209ENST00000613547 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 DUX5Q96PT3 197 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 GINS4Q9BRT9 223 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 CABLES2Q9BTV7 478 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 ABHD14AQ9BUJ0 271 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 ESM1Q9NQ30 184 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 TNFRSF19Q9NS68 423 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 EXTL2Q9UBQ6 330 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 VPREB3Q9UKI3 123 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 DSCAML1Q8TD84 2053 aa10.73□□□□□ -0.69
MDC1-209ENST00000613547 LY6LH3BQJ8 138 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 H3BUX3 64 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 HSD17B6O14756 317 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 TXNL1O43396 289 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 TPPPO94811 219 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 GAPDHP04406 335 aaKnown RBP10.72□□□□□ -0.69
MDC1-209ENST00000613547 GSTT2P0CG29 244 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 GSTT2BP0CG30 244 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 DYNLT3P51808 116 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 ARPC4P59998 168 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 CT45A1Q5HYN5 189 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 C16orf87Q6PH81 154 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 C5orf24Q7Z6I8 188 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 DTX3Q8N9I9 347 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 BEST4Q8NFU0 473 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 CT45A3Q8NHU0 189 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 TMEM158Q8WZ71 300 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 DCUN1D5Q9BTE7 237 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 SLIRPQ9GZT3 109 aaKnown RBP10.72□□□□□ -0.69
MDC1-209ENST00000613547 GHITMQ9H3K2 345 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 SCPEP1Q9HB40 452 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 IFT46Q9NQC8 304 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 OR1A1Q9P1Q5 309 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 PITPNC1Q9UKF7 332 aa10.72□□□□□ -0.69
MDC1-209ENST00000613547 CTDSP2O14595 271 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 ITGB1BP1O14713 200 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 CRYBA1P05813 215 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 IGSF11Q5DX21 431 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 KIAA2026Q5HYC2 2103 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 LDLRAD2Q5SZI1 272 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 FAM53AQ6NSI3 398 aaPredicted RBP10.71□□□□□ -0.69
MDC1-209ENST00000613547 CNIH2Q6PI25 160 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 HOGA1Q86XE5 327 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 SNX29P2Q8IUI4 249 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 LAX1Q8IWV1 398 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 OR8H3Q8N146 312 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 LYG1Q8N1E2 194 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 DYNAPQ8N1N2 210 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 FAM216AQ8WUB2 273 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 CHIAQ9BZP6 476 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 RAB18Q9NP72 206 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 RDH8Q9NYR8 311 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 RABL2AQ9UBK7 228 aaPredicted RBP10.71□□□□□ -0.69
MDC1-209ENST00000613547 ANXA10Q9UJ72 324 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 RABL2BQ9UNT1 228 aa10.71□□□□□ -0.69
MDC1-209ENST00000613547 TRBV6-7A0A0A0MS04 114 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 IGKV1-6A0A0C4DH72 117 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 DPPA5A6NC42 116 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 SLC31A2O15432 143 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 HLA-DQB1P01920 261 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 PTHLHP12272 177 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 PAX6P26367 422 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 ZNF134P52741 427 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 ZNF137PP52743 207 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 RPL15P61313 204 aaKnown RBP10.7□□□□□ -0.7
MDC1-209ENST00000613547 SRSF2Q01130 221 aaKnown RBP10.7□□□□□ -0.7
MDC1-209ENST00000613547 ZNF816Q0VGE8 651 aaPredicted RBP10.7□□□□□ -0.7
MDC1-209ENST00000613547 HERPUD1Q15011 391 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 KRTAP21-3Q3LHN1 58 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 LIAT1Q6ZQX7 453 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 TGIF2LXQ8IUE1 241 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 DIRAS2Q96HU8 199 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 MIXL1Q9H2W2 232 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 MMP27Q9H306 513 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 PIPOXQ9P0Z9 390 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 ZNF221Q9UK13 617 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 RBM7Q9Y580 266 aaKnown RBP10.7□□□□□ -0.7
MDC1-209ENST00000613547 A3GALT2U3KPV4 340 aa10.7□□□□□ -0.7
MDC1-209ENST00000613547 IGKV1D-8A0A087WSZ0 117 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 RNF212BA8MTL3 300 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 SULT1C2O00338 296 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 RAB29O14966 203 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 ST8SIA5O15466 376 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 LANCL1O43813 399 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 GPR137BO60478 399 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 S100A5P33763 92 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 ACTG1P63261 375 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 MRPS10P82664 201 aaKnown RBP10.69□□□□□ -0.7
MDC1-209ENST00000613547 LY6EQ16553 131 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 MOB3BQ86TA1 216 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 GVQW1Q8N7I0 195 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 CAPSLQ8WWF8 208 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 GCDHQ92947 438 aaPredicted RBP10.69□□□□□ -0.7
MDC1-209ENST00000613547 AKR1E2Q96JD6 320 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 S1PR3Q99500 378 aa10.69□□□□□ -0.7
MDC1-209ENST00000613547 TOLLIPQ9H0E2 274 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms