RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 YPEL1O60688 119 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 MAPK3P27361 379 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-215ENST00000612337 PPP1CCP36873 323 aaKnown RBP13.85□□□□□ -0.19
SSBP1-215ENST00000612337 ECI1P42126 302 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 LY6G6FQ5SQ64 297 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 C6orf141Q5SZD1 244 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 LAIR2Q6ISS4 152 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 TMEM65Q6PI78 240 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 C8orf59Q8N0T1 100 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-215ENST00000612337 RITA1Q96K30 269 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 YPEL2Q96QA6 119 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 NABP2Q9BQ15 211 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 MRPL20Q9BYC9 149 aaKnown RBP13.85□□□□□ -0.19
SSBP1-215ENST00000612337 CST11Q9H112 138 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 U3KQK5 164 aa13.85□□□□□ -0.19
SSBP1-215ENST00000612337 I3L521 148 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 MYL12BO14950 172 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 RGS11O94810 467 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 IGLV1-40P01703 118 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 WNT4P56705 351 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 RUNX1Q01196 453 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 KIAA0141Q14154 515 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-215ENST00000612337 ZNF260Q3ZCT1 412 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 ZNF833PQ6ZTB9 187 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 C5orf24Q7Z6I8 188 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 ZNF491Q8N8L2 437 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 FBLIM1Q8WUP2 373 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 FAM46BQ96A09 425 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 ZNF251Q9BRH9 671 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 KLK15Q9H2R5 256 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 OR51J1Q9H342 316 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 PLCXD1Q9NUJ7 323 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 PSORS1C1Q9UIG5 152 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 VSIG4Q9Y279 399 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 LRRC42Q9Y546 428 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 WSB1Q9Y6I7 421 aa13.84□□□□□ -0.19
SSBP1-215ENST00000612337 SORL1Q92673 2214 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 IGHV7-81A0A0B4J1V7 117 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 G3V318 75 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 ATP6V0E1O15342 81 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 NBR2O15453 112 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 OR8U8P0C7N1 319 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 CNTFRP26992 372 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 C5orf64Q2M2E5 130 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 NKAPLQ5M9Q1 402 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 OR1N2Q8NGR9 330 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 GALMQ96C23 342 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 ANKRD60Q9BZ19 345 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 GNB4Q9HAV0 340 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 PARP11Q9NR21 331 aa13.83□□□□□ -0.2
SSBP1-215ENST00000612337 DYNC2H1Q8NCM8 4307 aaKnown RBP13.83□□□□□ -0.2
SSBP1-215ENST00000612337 SAA2-SAA4A0A096LPE2 208 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 TRAV41A0A0B4J266 112 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 UBBP0CG47 229 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 SAA2P0DJI9 122 aaPredicted RBP13.82□□□□□ -0.2
SSBP1-215ENST00000612337 CHATP28329 748 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 OR3A3P47888 321 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 INSL3P51460 131 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 ZNF616Q08AN1 781 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 HMGN3Q15651 99 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 AHSA2Q719I0 299 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 NANOGP1Q8N7R0 232 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 NPBQ8NG41 125 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 OR2AK2Q8NG84 335 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 NEDD4LQ96PU5 975 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 SULT4A1Q9BR01 284 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 VCXQ9H320 206 aa13.82□□□□□ -0.2
SSBP1-215ENST00000612337 ZNF256Q9Y2P7 627 aaPredicted RBP13.82□□□□□ -0.2
SSBP1-215ENST00000612337 NDUFA3O95167 84 aa13.81□□□□□ -0.2
SSBP1-215ENST00000612337 BLVRBP30043 206 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-215ENST00000612337 RAB9AP51151 201 aa13.81□□□□□ -0.2
SSBP1-215ENST00000612337 ASPHD1Q5U4P2 390 aa13.81□□□□□ -0.2
SSBP1-215ENST00000612337 LIN54Q6MZP7 749 aa13.81□□□□□ -0.2
SSBP1-215ENST00000612337 FAM71F2Q6NXP2 309 aa13.81□□□□□ -0.2
SSBP1-215ENST00000612337 MINDY2Q8NBR6 621 aa13.81□□□□□ -0.2
SSBP1-215ENST00000612337 BPIFB6Q8NFQ5 453 aa13.81□□□□□ -0.2
SSBP1-215ENST00000612337 IFI27L2Q9H2X8 130 aa13.81□□□□□ -0.2
SSBP1-215ENST00000612337 ABRACLQ9P1F3 81 aa13.81□□□□□ -0.2
SSBP1-215ENST00000612337 KIAA1456Q9P272 454 aa13.81□□□□□ -0.2
SSBP1-215ENST00000612337 NKX1-2Q9UD57 310 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-215ENST00000612337 GNB1P62873 340 aa13.8□□□□□ -0.2
SSBP1-215ENST00000612337 RPS27AP62979 156 aaKnown RBP13.8□□□□□ -0.2
SSBP1-215ENST00000612337 INSL4Q14641 139 aa13.8□□□□□ -0.2
SSBP1-215ENST00000612337 C1orf100Q5SVJ3 147 aa13.8□□□□□ -0.2
SSBP1-215ENST00000612337 OR10K2Q6IF99 312 aa13.8□□□□□ -0.2
SSBP1-215ENST00000612337 FAAP24Q9BTP7 215 aa13.8□□□□□ -0.2
SSBP1-215ENST00000612337 TMEM59Q9BXS4 323 aa13.8□□□□□ -0.2
SSBP1-215ENST00000612337 FKBP14Q9NWM8 211 aa13.8□□□□□ -0.2
SSBP1-215ENST00000612337 PIPOXQ9P0Z9 390 aa13.8□□□□□ -0.2
SSBP1-215ENST00000612337 STEAP1Q9UHE8 339 aa13.8□□□□□ -0.2
SSBP1-215ENST00000612337 ERGIC3Q9Y282 383 aa13.8□□□□□ -0.2
SSBP1-215ENST00000612337 NDPQ00604 133 aa13.79□□□□□ -0.2
SSBP1-215ENST00000612337 ACSM3Q53FZ2 586 aa13.79□□□□□ -0.2
SSBP1-215ENST00000612337 GLT8D1Q68CQ7 371 aa13.79□□□□□ -0.2
SSBP1-215ENST00000612337 ZNF880Q6PDB4 577 aa13.79□□□□□ -0.2
SSBP1-215ENST00000612337 C6orf201Q7Z4U5 140 aa13.79□□□□□ -0.2
SSBP1-215ENST00000612337 LRRTM1Q86UE6 522 aa13.79□□□□□ -0.2
SSBP1-215ENST00000612337 ZNF429Q86V71 674 aa13.79□□□□□ -0.2
SSBP1-215ENST00000612337 SVOPQ8N4V2 548 aa13.79□□□□□ -0.2
SSBP1-215ENST00000612337 MS4A15Q8N5U1 240 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms