RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 OR5P3Q8WZ94 311 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 WBP1Q96G27 269 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 POM121Q96HA1 1249 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 TMEM147Q9BVK8 224 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 WFDC1Q9HC57 220 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 PTPRSQ13332 1948 aa7.43□□□□□ -1.22
LIG4-204ENST00000611712 PQLC2LA1A4F0 135 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 SPRY3O43610 288 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 UCP1P25874 307 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 SPEM2Q0P670 501 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 PNRC1Q12796 327 aaPredicted RBP7.42□□□□□ -1.22
LIG4-204ENST00000611712 ZNF826PQ6ZT77 177 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 SCCPDHQ8NBX0 429 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 DTD1Q8TEA8 209 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 UHRF2Q96PU4 802 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 CXXC4Q9H2H0 198 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 SERTAD4Q9NUC0 356 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 VAX2Q9UIW0 290 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 OOEPA6NGQ2 149 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 FABP4P15090 132 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 NDUFB7P17568 137 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 CEBPDP49716 269 aaPredicted RBP7.42□□□□□ -1.22
LIG4-204ENST00000611712 ZNF83P51522 516 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 HTD2P86397 168 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 KIAA2026Q5HYC2 2103 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 C5orf24Q7Z6I8 188 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 LYPD6Q86Y78 171 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 H1FOOQ8IZA3 346 aaPredicted RBP7.42□□□□□ -1.22
LIG4-204ENST00000611712 CYYR1Q96J86 154 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 ZNF251Q9BRH9 671 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 PKIBQ9C010 78 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 CLN8Q9UBY8 286 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 HNF1AP20823 631 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 RSPO1Q2MKA7 263 aaPredicted RBP7.42□□□□□ -1.22
LIG4-204ENST00000611712 ATP1A1-AS1Q5TC04 95 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 GMPPAQ96IJ6 420 aaPredicted RBP7.42□□□□□ -1.22
LIG4-204ENST00000611712 ABHD14AQ9BUJ0 271 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 KCNIP2Q9NS61 270 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 MIOXQ9UGB7 285 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 CACNA1HO95180 2353 aa7.42□□□□□ -1.22
LIG4-204ENST00000611712 LY6G6EA0A0G2JKS1 128 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 HSPB1P04792 205 aaKnown RBP7.41□□□□□ -1.22
LIG4-204ENST00000611712 CD5P06127 495 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 BCL2P10415 239 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 RPS2P15880 293 aaKnown RBP7.41□□□□□ -1.22
LIG4-204ENST00000611712 ACP1P24666 158 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 UCP2P55851 309 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 TRIP6Q15654 476 aaKnown RBP7.41□□□□□ -1.22
LIG4-204ENST00000611712 IGFBP7Q16270 282 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 NRN1LQ496H8 165 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 FOXL2NBQ6ZUU3 175 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 MRGPRGQ86SM5 289 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 FGFRL1Q8N441 504 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 OR52L2PQ8NGH6 319 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 IL22RA2Q969J5 263 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 USB1Q9BQ65 265 aaKnown RBP7.41□□□□□ -1.22
LIG4-204ENST00000611712 ANAPC10Q9UM13 185 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 U3KQA8 63 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 SOX15O60248 233 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 YIF1AO95070 293 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 LHX2P50458 406 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 Q0VFX4 171 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 ATP6V1FQ16864 119 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 LRTM2Q8N967 370 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 OR1L1Q8NH94 360 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 TMEM37Q8WXS4 190 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 OR4C12Q96R67 309 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 PROB1E7EW31 1015 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 C3orf80F5H4A9 247 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 LYL1P12980 280 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 ANOS1P23352 680 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 B3GALT5-AS1P59052 145 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 SERF2P84101 59 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 BSXQ3C1V8 233 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 INO80CQ6PI98 192 aaPredicted RBP7.41□□□□□ -1.22
LIG4-204ENST00000611712 ZNF66Q6ZN08 573 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 TMEM56Q96MV1 263 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 SIRT7Q9NRC8 400 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 GLRX2Q9NS18 164 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 TMEM56-RWDD3S4R434 201 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 ST8SIA5O15466 376 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 HOXA6P31267 233 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 CDC34P49427 236 aaPredicted RBP7.41□□□□□ -1.22
LIG4-204ENST00000611712 CLDN18P56856 261 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 TMEM42Q69YG0 159 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 DPPA3Q6W0C5 159 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 POM121L2Q96KW2 1035 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 PATZ1Q9HBE1 687 aaKnown RBP7.41□□□□□ -1.22
LIG4-204ENST00000611712 PROK2Q9HC23 129 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 RPRMQ9NS64 109 aa7.41□□□□□ -1.22
LIG4-204ENST00000611712 MRPS18CQ9Y3D5 142 aaKnown RBP7.41□□□□□ -1.22
LIG4-204ENST00000611712 NCOA6Q14686 2063 aaPredicted RBP7.4□□□□□ -1.22
LIG4-204ENST00000611712 LNP1A1A4G5 178 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 B4DEV8 164 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 M0R296 226 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 SCGB1D1O95968 90 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 HBZP02008 142 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 OPN1MWP04001 364 aa7.4□□□□□ -1.22
LIG4-204ENST00000611712 MMP7P09237 267 aaPredicted RBP7.4□□□□□ -1.22
LIG4-204ENST00000611712 OPN1MW2P0DN77 364 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms