RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	SHANK1	Q9Y566	2161 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	TRGV8	A0A0C4DH27	118 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614		A0A0G2JNJ9	132 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	PPIH	O43447	177 aa	Known RBP	11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	LILRA1	O75019	489 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	AGFG2	O95081	481 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	DAO	P14920	347 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	RPS23	P62266	143 aa	Known RBP	11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	SPIN3	Q5JUX0	258 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	C5orf24	Q7Z6I8	188 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	TBC1D26	Q86UD7	250 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	WDR31	Q8NA23	367 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	SPIN2A	Q99865	258 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	SPIN2B	Q9BPZ2	258 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614		Q9UFV3	132 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	ATP23	Q9Y6H3	246 aa		11.76	□□□□□ -0.53
COPS7B-223	ENST00000611614	HSPB6	O14558	160 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	TUSC2	O75896	110 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	IGKV3-15	P01624	115 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	ARG1	P05089	322 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	CELA3B	P08861	270 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	HOXA5	P20719	270 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	IL24	Q13007	206 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	HERPUD1	Q15011	391 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	TMEM95	Q3KNT9	176 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	TIMM23B	Q5SRD1	257 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	MRGPRG	Q86SM5	289 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	HSD17B11	Q8NBQ5	300 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	RND1	Q92730	232 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	TMEM56	Q96MV1	263 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	PKIB	Q9C010	78 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	SLC25A31	Q9H0C2	315 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	TOLLIP	Q9H0E2	274 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	SH3BGRL3	Q9H299	93 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	C11orf1	Q9H5F2	150 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	DMRT1	Q9Y5R6	373 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	TMEM56-RWDD3	S4R434	201 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	RBFOX3	A6NFN3	312 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614		A8MXE2	369 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	HSPA12A	O43301	675 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	OR13C7	P0DN81	318 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	FHIT	P49789	147 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	OR2T2	Q6IF00	324 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	CLEC9A	Q6UXN8	241 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	ZNF600	Q6ZNG1	722 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	ZNF818P	Q6ZRF7	136 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	FAM58A	Q8N1B3	248 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	MRPL30	Q8TCC3	161 aa	Known RBP	11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	ZNF488	Q96MN9	340 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	VKORC1	Q9BQB6	163 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	KIAA1456	Q9P272	454 aa		11.75	□□□□□ -0.53
COPS7B-223	ENST00000611614	TRBV6-6	A0A0A6YYG2	114 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	PPP1CC	P36873	323 aa	Known RBP	11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	OR2B8P	P59922	312 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	LY6D	Q14210	128 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	ZNF695	Q8IW36	515 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	GAPT	Q8N292	157 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	OR2C3	Q8N628	320 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	OR51I2	Q9H344	312 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	SIRT7	Q9NRC8	400 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	IGKV1-6	A0A0C4DH72	117 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	NKX2-6	A6NCS4	301 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	CXorf65	A6NEN9	183 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	CA6	P23280	308 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	NHLH2	Q02577	135 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	KIAA0141	Q14154	515 aa	Predicted RBP	11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	SELENOH	Q8IZQ5	122 aa	Known RBP	11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	ST6GALNAC3	Q8NDV1	305 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	S100PBP	Q96BU1	408 aa		11.74	□□□□□ -0.53
COPS7B-223	ENST00000611614	IGKV1D-13	A0A0B4J2D9	117 aa		11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	C1QL1	O75973	258 aa		11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	IGKV1-13	P0DP09	117 aa		11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	MMP9	P14780	707 aa		11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	CDX1	P47902	265 aa	Predicted RBP	11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	PPP1CB	P62140	327 aa		11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	FAM169B	Q8N8A8	192 aa		11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	OR2G3	Q8NGZ4	309 aa		11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	HIPK2	Q9H2X6	1198 aa		11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	PLEKHF2	Q9H8W4	249 aa		11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	ELOVL5	Q9NYP7	299 aa		11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	TPR	P12270	2363 aa	Known RBP	11.73	□□□□□ -0.53
COPS7B-223	ENST00000611614	TRAV24	A0A0B4J272	114 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	DUXB	A0A1W2PPF3	345 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614		J3QT63	122 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	HS3ST1	O14792	307 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	SMPD2	O60906	423 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	SPATA46	Q5T0L3	261 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	ZNF880	Q6PDB4	577 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	DPPA3	Q6W0C5	159 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	MYPOP	Q86VE0	399 aa	Predicted RBP	11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	CCL28	Q9NRJ3	127 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	SLC25A15	Q9Y619	301 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	ARID1A	O14497	2285 aa		11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	ZNF729	A6NN14	1252 aa	Predicted RBP	11.72	□□□□□ -0.53
COPS7B-223	ENST00000611614	HSD17B6	O14756	317 aa		11.72	□□□□□ -0.53

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