RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TOMM40LQ969M1 308 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 ABHD14AQ9BUJ0 271 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 ST6GALNAC5Q9BVH7 336 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 CHIAQ9BZP6 476 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 GHITMQ9H3K2 345 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 NDUFA13Q9P0J0 144 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 SLC23A1Q9UHI7 598 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 ZNF230Q9UIE0 474 aaPredicted RBP11.52□□□□□ -0.57
CTSA-219ENST00000607841 ADAM30Q9UKF2 790 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 PITPNC1Q9UKF7 332 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 VPREB3Q9UKI3 123 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 DNHD1Q96M86 4753 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 RNF212BA8MTL3 300 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 ITGB1BP1O14713 200 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 RGS5O15539 181 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 GAPDHP04406 335 aaKnown RBP11.51□□□□□ -0.57
CTSA-219ENST00000607841 EIF4EP06730 217 aaKnown RBP11.51□□□□□ -0.57
CTSA-219ENST00000607841 CTXN2P0C2S0 81 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 GSTT2P0CG29 244 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 GSTT2BP0CG30 244 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 ELK1P19419 428 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 PAX6P26367 422 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 CEACAM6P40199 344 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 ZNF134P52741 427 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 TAS2R20P59543 309 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 GNMTQ14749 295 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 KRTAP24-1Q3LI83 254 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 FAM53AQ6NSI3 398 aaPredicted RBP11.51□□□□□ -0.57
CTSA-219ENST00000607841 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 OR8H3Q8N146 312 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 OR10J5Q8NHC4 309 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 MAFIPQ8WZ33 124 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 RAB18Q9NP72 206 aa11.51□□□□□ -0.57
CTSA-219ENST00000607841 KIAA2026Q5HYC2 2103 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 HSD17B6O14756 317 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 SLC31A2O15432 143 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 TXNL1O43396 289 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 SSX5O60225 188 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 ACTG1P63261 375 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 DTX3Q8N9I9 347 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 C15orf40Q8WUR7 153 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 CABLES2Q9BTV7 478 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 RBM38Q9H0Z9 239 aaKnown RBP11.5□□□□□ -0.57
CTSA-219ENST00000607841 PIPOXQ9P0Z9 390 aa11.5□□□□□ -0.57
CTSA-219ENST00000607841 MRPS7Q9Y2R9 242 aaKnown RBP11.5□□□□□ -0.57
CTSA-219ENST00000607841 TRBV6-7A0A0A0MS04 114 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 IGKV1-6A0A0C4DH72 117 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 FAM181BA6NEQ2 426 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 BET1O15155 118 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 GPR137BO60478 399 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 TPPPO94811 219 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 FAM106CPP0CH98 169 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 PRSS3P35030 304 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 RAB13P51153 203 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 ZNF137PP52743 207 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 ZNF816Q0VGE8 651 aaPredicted RBP11.49□□□□□ -0.57
CTSA-219ENST00000607841 LY6EQ16553 131 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 IGSF11Q5DX21 431 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 CNIH2Q6PI25 160 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 HOGA1Q86XE5 327 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.49□□□□□ -0.57
CTSA-219ENST00000607841 PIFOQ8TCI5 191 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 ST6GALNAC6Q969X2 333 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 GINS4Q9BRT9 223 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 C19orf24Q9BVV8 132 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 TOLLIPQ9H0E2 274 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 RDH8Q9NYR8 311 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 OR1A1Q9P1Q5 309 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 EXTL2Q9UBQ6 330 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 ANXA10Q9UJ72 324 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 TCF19Q9Y242 345 aa11.49□□□□□ -0.57
CTSA-219ENST00000607841 RAB29O14966 203 aa11.48□□□□□ -0.57
CTSA-219ENST00000607841 HLA-DQB1P01920 261 aa11.48□□□□□ -0.57
CTSA-219ENST00000607841 ARPC4P59998 168 aa11.48□□□□□ -0.57
CTSA-219ENST00000607841 HERPUD1Q15011 391 aa11.48□□□□□ -0.57
CTSA-219ENST00000607841 DHRS7BQ6IAN0 325 aaPredicted RBP11.48□□□□□ -0.57
CTSA-219ENST00000607841 TGIF2LXQ8IUE1 241 aa11.48□□□□□ -0.57
CTSA-219ENST00000607841 BEST4Q8NFU0 473 aa11.48□□□□□ -0.57
CTSA-219ENST00000607841 MCFD2Q8NI22 146 aa11.48□□□□□ -0.57
CTSA-219ENST00000607841 RTN4IP1Q8WWV3 396 aaPredicted RBP11.48□□□□□ -0.57
CTSA-219ENST00000607841 GCDHQ92947 438 aaPredicted RBP11.48□□□□□ -0.57
CTSA-219ENST00000607841 DGCR14Q96DF8 476 aaKnown RBP11.48□□□□□ -0.57
CTSA-219ENST00000607841 S1PR3Q99500 378 aa11.48□□□□□ -0.57
CTSA-219ENST00000607841 SLIRPQ9GZT3 109 aaKnown RBP11.48□□□□□ -0.57
CTSA-219ENST00000607841 C6orf62Q9GZU0 229 aaPredicted RBP11.48□□□□□ -0.57
CTSA-219ENST00000607841 SCPEP1Q9HB40 452 aa11.48□□□□□ -0.57
CTSA-219ENST00000607841 IFT46Q9NQC8 304 aa11.48□□□□□ -0.57
CTSA-219ENST00000607841 IGKV1D-8A0A087WSZ0 117 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 IGHV1-3A0A0C4DH29 117 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 A0A1W2PPI3 338 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 A6NDX4 124 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 CTDSP2O14595 271 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 TIMM23O14925 209 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 ST8SIA5O15466 376 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 LANCL1O43813 399 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 HKR1P10072 659 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 PTHLHP12272 177 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 REG1BP48304 166 aa11.47□□□□□ -0.57
CTSA-219ENST00000607841 DIAPH2-AS1Q14236 149 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms