RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 LSM4Q9Y4Z0 139 aaKnown RBP13.26□□□□□ -0.29
SCAF1-204ENST00000601038 SEC14L6B5MCN3 397 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 NHLRC4P0CG21 123 aaPredicted RBP13.25□□□□□ -0.29
SCAF1-204ENST00000601038 UBBP0CG47 229 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 MYF6P23409 242 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 KIAA0141Q14154 515 aaPredicted RBP13.25□□□□□ -0.29
SCAF1-204ENST00000601038 NKAPLQ5M9Q1 402 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 TMEM65Q6PI78 240 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 ZNF833PQ6ZTB9 187 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 C5orf24Q7Z6I8 188 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 OR11H1Q8NG94 326 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 RITA1Q96K30 269 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 ZNF251Q9BRH9 671 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 MRPL20Q9BYC9 149 aaKnown RBP13.25□□□□□ -0.29
SCAF1-204ENST00000601038 OR51J1Q9H342 316 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 ERGIC3Q9Y282 383 aa13.25□□□□□ -0.29
SCAF1-204ENST00000601038 G3V318 75 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 NBR2O15453 112 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 HLA-DRB1P01911 266 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 CHATP28329 748 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 ECI1P42126 302 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 ACSM3Q53FZ2 586 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 MS4A15Q8N5U1 240 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 ZNF491Q8N8L2 437 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 BPIFB6Q8NFQ5 453 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 SULT4A1Q9BR01 284 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 ANKRD60Q9BZ19 345 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 KLK15Q9H2R5 256 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 FKBP14Q9NWM8 211 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 WSB1Q9Y6I7 421 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 COL7A1Q02388 2944 aa13.24□□□□□ -0.29
SCAF1-204ENST00000601038 SAA2-SAA4A0A096LPE2 208 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 IGHV7-81A0A0B4J1V7 117 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 I3L521 148 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 ATP6V0E1O15342 81 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 IGLV1-40P01703 118 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 SAA2P0DJI9 122 aaPredicted RBP13.23□□□□□ -0.29
SCAF1-204ENST00000601038 VSIG8P0DPA2 414 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 CNTFRP26992 372 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 OR3A3P47888 321 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 RUNX1Q01196 453 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 INSL4Q14641 139 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 HMGN3Q15651 99 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 C5orf64Q2M2E5 130 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 ZNF260Q3ZCT1 412 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 C1orf100Q5SVJ3 147 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 GLT8D1Q68CQ7 371 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 LIN54Q6MZP7 749 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 NPBQ8NG41 125 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 OR2AK2Q8NG84 335 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 PRR25Q96S07 402 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 FAAP24Q9BTP7 215 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 ABRACLQ9P1F3 81 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 VSIG4Q9Y279 399 aa13.23□□□□□ -0.29
SCAF1-204ENST00000601038 TRAV41A0A0B4J266 112 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 OR8U8P0C7N1 319 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 INSL3P51460 131 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 RPS27AP62979 156 aaKnown RBP13.22□□□□□ -0.29
SCAF1-204ENST00000601038 RCN1Q15293 331 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 RNLSQ5VYX0 342 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 OR10K2Q6IF99 312 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 FAM71F2Q6NXP2 309 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 C6orf201Q7Z4U5 140 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 LRRTM1Q86UE6 522 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 OR1N2Q8NGR9 330 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 KCNG3Q8TAE7 436 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 PHYHIPQ92561 330 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 TMEM59Q9BXS4 323 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 IFI27L2Q9H2X8 130 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 GNB4Q9HAV0 340 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 PARP11Q9NR21 331 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 STEAP1Q9UHE8 339 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 U3KQK5 164 aa13.22□□□□□ -0.29
SCAF1-204ENST00000601038 NDUFA3O95167 84 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 NAPSAO96009 420 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 CD37P11049 281 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 HTR2CP28335 458 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 RAB9AP51151 201 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 GABPB1Q06547 395 aaPredicted RBP13.21□□□□□ -0.29
SCAF1-204ENST00000601038 ZNF616Q08AN1 781 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 FAM27D1Q5T7N8 215 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 OGFRL1Q5TC84 451 aaPredicted RBP13.21□□□□□ -0.29
SCAF1-204ENST00000601038 MINDY2Q8NBR6 621 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 IL1F10Q8WWZ1 152 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 MND1Q9BWT6 205 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 TM2D1Q9BX74 207 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 PIPOXQ9P0Z9 390 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 KIAA1456Q9P272 454 aa13.21□□□□□ -0.29
SCAF1-204ENST00000601038 RAB29O14966 203 aa13.2□□□□□ -0.3
SCAF1-204ENST00000601038 CDK1P06493 297 aa13.2□□□□□ -0.3
SCAF1-204ENST00000601038 SRMP19623 302 aa13.2□□□□□ -0.3
SCAF1-204ENST00000601038 BLVRBP30043 206 aaPredicted RBP13.2□□□□□ -0.3
SCAF1-204ENST00000601038 RBM48Q5RL73 367 aaKnown RBP13.2□□□□□ -0.3
SCAF1-204ENST00000601038 ASPHD1Q5U4P2 390 aa13.2□□□□□ -0.3
SCAF1-204ENST00000601038 ZNF880Q6PDB4 577 aa13.2□□□□□ -0.3
SCAF1-204ENST00000601038 SVOPQ8N4V2 548 aa13.2□□□□□ -0.3
SCAF1-204ENST00000601038 TMED9Q9BVK6 235 aa13.2□□□□□ -0.3
SCAF1-204ENST00000601038 SLC23A1Q9UHI7 598 aa13.2□□□□□ -0.3
SCAF1-204ENST00000601038 ZNF256Q9Y2P7 627 aaPredicted RBP13.2□□□□□ -0.3
SCAF1-204ENST00000601038 TMEM14DPA8MWL7 114 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms