RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 GAPDHP04406 335 aaKnown RBP11.12□□□□□ -0.63
SNRPA-208ENST00000600456 LPLP06858 475 aa11.12□□□□□ -0.63
SNRPA-208ENST00000600456 ZNF182P17025 639 aaPredicted RBP11.12□□□□□ -0.63
SNRPA-208ENST00000600456 GNG2P59768 71 aa11.12□□□□□ -0.63
SNRPA-208ENST00000600456 ZNF816Q0VGE8 651 aaPredicted RBP11.12□□□□□ -0.63
SNRPA-208ENST00000600456 DHRS7BQ6IAN0 325 aaPredicted RBP11.12□□□□□ -0.63
SNRPA-208ENST00000600456 FAM53AQ6NSI3 398 aaPredicted RBP11.12□□□□□ -0.63
SNRPA-208ENST00000600456 MZT2AQ6P582 158 aa11.12□□□□□ -0.63
SNRPA-208ENST00000600456 OR2AK2Q8NG84 335 aa11.12□□□□□ -0.63
SNRPA-208ENST00000600456 ST6GALNAC6Q969X2 333 aa11.12□□□□□ -0.63
SNRPA-208ENST00000600456 ABHD14AQ9BUJ0 271 aa11.12□□□□□ -0.63
SNRPA-208ENST00000600456 A0A1W2PPI3 338 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 TMEM235A6NFC5 223 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 ITGB1BP1O14713 200 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 SLC31A2O15432 143 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 XRCC3O43542 346 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 APOA1P02647 267 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 SCTP09683 121 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 RAB13P51153 203 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 ZNF134P52741 427 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 LY6EQ16553 131 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 C5orf24Q7Z6I8 188 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 DTX3Q8N9I9 347 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 OR4F5Q8NH21 305 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 EDARADDQ8WWZ3 215 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 CABLES2Q9BTV7 478 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 GHITMQ9H3K2 345 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 AUNIPQ9H7T9 357 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 C1RLQ9NZP8 487 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 COMMD3Q9UBI1 195 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 SLC23A1Q9UHI7 598 aa11.11□□□□□ -0.63
SNRPA-208ENST00000600456 A0A1B0GUS0 222 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 HSPA12AO43301 675 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 LANCL1O43813 399 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 FAM106CPP0CH98 169 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 SOX6P35712 828 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 RAG2P55895 527 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 HABP2Q14520 560 aaPredicted RBP11.1□□□□□ -0.63
SNRPA-208ENST00000600456 SPCS2Q15005 226 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 TMEM69Q5SWH9 247 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 C16orf82Q7Z2V1 217 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 THNSL2Q86YJ6 484 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 LYG1Q8N1E2 194 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 NUDCD2Q8WVJ2 157 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 RTN4IP1Q8WWV3 396 aaPredicted RBP11.1□□□□□ -0.63
SNRPA-208ENST00000600456 TOLLIPQ9H0E2 274 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 RANBP3Q9H6Z4 567 aaPredicted RBP11.1□□□□□ -0.63
SNRPA-208ENST00000600456 ZNF230Q9UIE0 474 aaPredicted RBP11.1□□□□□ -0.63
SNRPA-208ENST00000600456 ELF5Q9UKW6 265 aaPredicted RBP11.1□□□□□ -0.63
SNRPA-208ENST00000600456 MMP24Q9Y5R2 645 aa11.1□□□□□ -0.63
SNRPA-208ENST00000600456 TRBV6-7A0A0A0MS04 114 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 IGHV1-3A0A0C4DH29 117 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 IGKV1-6A0A0C4DH72 117 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 FAM90A9PA6NNJ1 464 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 TIMM23O14925 209 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 SSX5O60225 188 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 CTXN2P0C2S0 81 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 GSTT2P0CG29 244 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 GSTT2BP0CG30 244 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 CEACAM6P40199 344 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 CBX5P45973 191 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 RELBQ01201 579 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 DIAPH2-AS1Q14236 149 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 HERPUD1Q15011 391 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 FAM71F2Q6NXP2 309 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 CCBE1Q6UXH8 406 aaPredicted RBP11.09□□□□□ -0.63
SNRPA-208ENST00000600456 C12orf54Q6X4T0 127 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 TGIF2LXQ8IUE1 241 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 OR10J5Q8NHC4 309 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 CFHR4Q92496 578 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 ISOC1Q96CN7 298 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 AKR1E2Q96JD6 320 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 ST6GALNAC5Q9BVH7 336 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 NPFFR1Q9GZQ6 430 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 IFI27L2Q9H2X8 130 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 PIPOXQ9P0Z9 390 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 OR1A1Q9P1Q5 309 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 STAB1Q9NY15 2570 aa11.09□□□□□ -0.63
SNRPA-208ENST00000600456 SMIM31A0A1B0GVY4 71 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 H3BMQ9 156 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 RAB29O14966 203 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 CHST1O43916 411 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 TSPAN9O75954 239 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 EIF4EP06730 217 aaKnown RBP11.08□□□□□ -0.64
SNRPA-208ENST00000600456 REG1BP48304 166 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 TAS2R20P59543 309 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 AWAT1Q58HT5 328 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 ODF3L1Q8IXM7 274 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 IZUMO1Q8IYV9 350 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 DRAM1Q8N682 238 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 OR4C13Q8NGP0 309 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 OR56B4Q8NH76 319 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 DYNC2LI1Q8TCX1 351 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 CAPSLQ8WWF8 208 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 MAFIPQ8WZ33 124 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 AGMATQ9BSE5 352 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 C16orf95Q9H693 158 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 RDH8Q9NYR8 311 aa11.08□□□□□ -0.64
SNRPA-208ENST00000600456 CCDC59Q9P031 241 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms