RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 ALPLP05186 524 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 OR8U9P0C7N5 309 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 SERPINA2P20848 420 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 ZNF93P35789 620 aaPredicted RBP4.66□□□□□ -1.66
VRK3-220ENST00000600259 CHRNA7P36544 502 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 OR3A3P47888 321 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 RPS11P62280 158 aaKnown RBP eCLIP4.66□□□□□ -1.66
VRK3-220ENST00000600259 HTD2P86397 168 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 KLF5Q13887 457 aaPredicted RBP4.66□□□□□ -1.66
VRK3-220ENST00000600259 LRRC36Q1X8D7 754 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 TMEM30BQ3MIR4 351 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 AKIRIN2Q53H80 203 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 C6orf141Q5SZD1 244 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 ATAD3CQ5T2N8 411 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 OR52I1Q8NGK6 324 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 TMEM106AQ96A25 262 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 FLYWCH2Q96CP2 140 aaKnown RBP4.66□□□□□ -1.66
VRK3-220ENST00000600259 YPEL2Q96QA6 119 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 OR4C12Q96R67 309 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 SPATA25Q9BR10 227 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 FAM192AQ9GZU8 254 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 GHITMQ9H3K2 345 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 FBXL15Q9H469 300 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 TAF9BQ9HBM6 251 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 AMBNQ9NP70 447 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 OR2S2Q9NQN1 319 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 ETAA1Q9NY74 926 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 CNOT2Q9NZN8 540 aaKnown RBP4.66□□□□□ -1.66
VRK3-220ENST00000600259 GNG12Q9UBI6 72 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 TRAPPC2LQ9UL33 140 aa4.66□□□□□ -1.66
VRK3-220ENST00000600259 FOXA2Q9Y261 457 aaPredicted RBP4.66□□□□□ -1.66
VRK3-220ENST00000600259 MRPS28Q9Y2Q9 187 aaKnown RBP4.66□□□□□ -1.66
VRK3-220ENST00000600259 FRAS1Q86XX4 4008 aa4.65□□□□□ -1.66
VRK3-220ENST00000600259 DNAH10Q8IVF4 4471 aa4.65□□□□□ -1.66
VRK3-220ENST00000600259 TRAV8-7A0A075B6U6 113 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 TRBV5-5A0A0J9YX44 114 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 IZUMO1RA6ND01 250 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 SAC3D1A6NKF1 404 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 MCRIP1C9JLW8 97 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 ZNF780AO75290 641 aaPredicted RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 CA11O75493 328 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 LALBAP00709 142 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 CSTBP04080 98 aaKnown RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 GLAP06280 429 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 CT45A6P0DMU7 189 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 CT45A5P0DMU8 189 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 CT45A7P0DMV0 189 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 GTF2F2P13984 249 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 BDKRB2P30411 391 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 PPP1CCP36873 323 aaKnown RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 SMCPP49901 116 aaPredicted RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 GBX2P52951 348 aaPredicted RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 SSBP2P81877 361 aaPredicted RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 PITPNAQ00169 270 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 MRPL28Q13084 256 aaKnown RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 ECSCRQ19T08 205 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 ZIK1Q3SY52 487 aaPredicted RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 SLC22A6Q4U2R8 563 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 C6orf183Q5T699 404 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 DDI2Q5TDH0 399 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 RAB12Q6IQ22 244 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 RPL22L1Q6P5R6 122 aaKnown RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 ZNF562Q6V9R5 426 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 ZNF554Q86TJ5 538 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 PPP1R27Q86WC6 154 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 PRR18Q8N4B5 295 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 TCTEX1D1Q8N7M0 179 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 MRPL30Q8TCC3 161 aaKnown RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 GPR148Q8TDV2 347 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 TSEN15Q8WW01 171 aaKnown RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 MRPS24Q96EL2 167 aaKnown RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 CPNE2Q96FN4 548 aaPredicted RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 RDH12Q96NR8 316 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 MS4A10Q96PG2 267 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 OR14A2Q96R54 314 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 ABHD14AQ9BUJ0 271 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 CST11Q9H112 138 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 HIPK2Q9H2X6 1198 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 IFI27L2Q9H2X8 130 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 SPACA1Q9HBV2 294 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 FGF20Q9NP95 211 aaPredicted RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 PAK1IP1Q9NWT1 392 aaPredicted RBP4.65□□□□□ -1.67
VRK3-220ENST00000600259 IMPAD1Q9NX62 359 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 JPT1Q9UK76 154 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 STUB1Q9UNE7 303 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 PEX16Q9Y5Y5 336 aa4.65□□□□□ -1.67
VRK3-220ENST00000600259 SAA2-SAA4A0A096LPE2 208 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 TRBV5-7A0A0A0MS05 114 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 UBE2QL1A1L167 161 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 FAM90A7PA6NKC0 464 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 FAM90A23PA8MXZ1 464 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 H0YJW9 148 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 EI24O14681 340 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 RGS11O94810 467 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 CSN3P07498 182 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 SAA2P0DJI9 122 aaPredicted RBP4.64□□□□□ -1.67
VRK3-220ENST00000600259 FCGR1AP12314 374 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 ARSBP15848 533 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 FUT3P21217 361 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 ETV1P50549 477 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms