RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 SOCS1O15524 211 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 DENRO43583 198 aaKnown RBP8.31□□□□□ -1.08
CCDC9-203ENST00000596938 GALP22466 123 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 PPP1CCP36873 323 aaKnown RBP8.31□□□□□ -1.08
CCDC9-203ENST00000596938 GNMTQ14749 295 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 P2RY14Q15391 338 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 SSX1Q16384 188 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 C2orf76Q3KRA6 126 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 C10orf99Q6UWK7 81 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 MOB1BQ7L9L4 216 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 C5orf24Q7Z6I8 188 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 SLC35E3Q7Z769 313 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 ZNF329Q86UD4 541 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 FOXRED2Q8IWF2 684 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 ODF3L1Q8IXM7 274 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 SVOPQ8N4V2 548 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 COMMD1Q8N668 190 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 OR51D1Q8NGF3 324 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 FAM3DQ96BQ1 224 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 NOL4LQ96MY1 436 aaPredicted RBP8.31□□□□□ -1.08
CCDC9-203ENST00000596938 S1PR3Q99500 378 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 ABHD14AQ9BUJ0 271 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 YTHDF1Q9BYJ9 559 aaKnown RBP8.31□□□□□ -1.08
CCDC9-203ENST00000596938 GHITMQ9H3K2 345 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 KCNK15Q9H427 330 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 ZFP57Q9NU63 452 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 STEAP1Q9UHE8 339 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 MGAT4AQ9UM21 535 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 TGP01266 2768 aa8.31□□□□□ -1.08
CCDC9-203ENST00000596938 TRDV1A0A1B0GX56 115 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 LINC01548A6NM66 108 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 AP4M1O00189 453 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 ITGB1BP1O14713 200 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 PDCD5O14737 125 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 LDLRAD4O15165 306 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 PF4V1P10720 104 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 SLC6A1P30531 599 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 GPR12P47775 334 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 F2RL1P55085 397 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 GABARAPL2P60520 117 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 SLC35B1P78383 322 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 LSAMPQ13449 338 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 OXLD1Q5BKU9 147 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 Q6ZPA2 131 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 ZNF833PQ6ZTB9 187 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 STPG2Q8N412 459 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 FAM71E2Q8N5Q1 922 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 OR2AK2Q8NG84 335 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 OR56B1Q8NGI3 324 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 IL1F10Q8WWZ1 152 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 RASL11BQ9BPW5 248 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 GON7Q9BXV9 100 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 CHMP1AQ9HD42 196 aaPredicted RBP8.3□□□□□ -1.08
CCDC9-203ENST00000596938 NDUFB11Q9NX14 153 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 AK3Q9UIJ7 227 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 RAB22AQ9UL26 194 aa8.3□□□□□ -1.08
CCDC9-203ENST00000596938 DNAH3Q8TD57 4116 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 RAB29O14966 203 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 CD33P20138 364 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 SOX6P35712 828 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 VEGFCP49767 419 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 CLDN12P56749 244 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 PNLIPRP3Q17RR3 467 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 UBE2UQ5VVX9 321 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 FAM71F2Q6NXP2 309 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 TEX38Q6PEX7 206 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 REC114Q7Z4M0 266 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 SPARTQ8N0X7 666 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 ARHGAP5-AS1Q96IT6 56 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 NABP2Q9BQ15 211 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 AGMATQ9BSE5 352 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 PECRQ9BY49 303 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 Q9H521 79 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 Q9N2K0 584 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 C12orf4Q9NQ89 552 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 PIPOXQ9P0Z9 390 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 SLC23A1Q9UHI7 598 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 LINC00527Q9UJ94 153 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 ZNF580Q9UK33 172 aa8.29□□□□□ -1.08
CCDC9-203ENST00000596938 TMEM272A0A1B0GTI8 110 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 IFITM5A6NNB3 132 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 PF4P02776 101 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 IGF1P05019 195 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 ZBTB25P24278 435 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 CEACAM6P40199 344 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 OR3A3P47888 321 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 RPL23AP62750 156 aaKnown RBP8.28□□□□□ -1.08
CCDC9-203ENST00000596938 PLAC9Q5JTB6 97 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 RNF152Q8N8N0 203 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 SETD6Q8TBK2 473 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 PTX4Q96A99 478 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 CMSS1Q9BQ75 279 aaKnown RBP8.28□□□□□ -1.08
CCDC9-203ENST00000596938 ZNF251Q9BRH9 671 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 CHCHD6Q9BRQ6 235 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 MRPL20Q9BYC9 149 aaKnown RBP8.28□□□□□ -1.08
CCDC9-203ENST00000596938 IFI27L2Q9H2X8 130 aa8.28□□□□□ -1.08
CCDC9-203ENST00000596938 SAA2-SAA4A0A096LPE2 208 aa8.27□□□□□ -1.09
CCDC9-203ENST00000596938 SHISA3A0PJX4 238 aa8.27□□□□□ -1.09
CCDC9-203ENST00000596938 TRDCB7Z8K6 153 aa8.27□□□□□ -1.09
CCDC9-203ENST00000596938 RRP9O43818 475 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms