RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 ZNRD1Q9P1U0 126 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 RABL2AQ9UBK7 228 aaPredicted RBP6.77□□□□□ -1.33
VRK3-211ENST00000596445 ANXA10Q9UJ72 324 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 RABL2BQ9UNT1 228 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 ATRQ13535 2644 aa6.77□□□□□ -1.33
VRK3-211ENST00000596445 FBN1P35555 2871 aaKnown RBP6.76□□□□□ -1.33
VRK3-211ENST00000596445 IGKV1D-8A0A087WSZ0 117 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 TRBV6-7A0A0A0MS04 114 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 A0A1W2PPE3 182 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 VGLL3A8MV65 326 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 OOSP1A8MZH6 123 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 CLDN34H7C241 214 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 SULT1C2O00338 296 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 ITGB1BP1O14713 200 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 BET1O15155 118 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 CTXN2P0C2S0 81 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 IL3RAP26951 378 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 TNFSF8P32971 234 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 S100A5P33763 92 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 IER3P46695 156 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 RAB7AP51149 207 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 BAMBIQ13145 260 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 MADCAM1Q13477 382 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 SSX2Q16385 188 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 TPTE2P1Q5T6R2 138 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 PRIMA1Q86XR5 153 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 DYNAPQ8N1N2 210 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 BEST4Q8NFU0 473 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 OR2AK2Q8NG84 335 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 OR10J5Q8NHC4 309 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 GPX8Q8TED1 209 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 SSMEM1Q8WWF3 244 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 EDARADDQ8WWZ3 215 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 GCDHQ92947 438 aaPredicted RBP6.76□□□□□ -1.33
VRK3-211ENST00000596445 ABHD1Q96SE0 405 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 ABHD14AQ9BUJ0 271 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 TOLLIPQ9H0E2 274 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 DPAGT1Q9H3H5 408 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 ESM1Q9NQ30 184 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 IFT46Q9NQC8 304 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 ANAPC10Q9UM13 185 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 HILPDAQ9Y5L2 63 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 POMT1Q9Y6A1 747 aa6.76□□□□□ -1.33
VRK3-211ENST00000596445 MEIS3P1A6NDR6 274 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 DNAJC9-AS1A6NH13 148 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 SLC31A2O15432 143 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 HOXA3O43365 443 aaPredicted RBP6.75□□□□□ -1.33
VRK3-211ENST00000596445 VENTXO95231 258 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 NAT1P18440 290 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 PAX6P26367 422 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 DYNLT3P51808 116 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 ARHGDIBP52566 201 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 ZNF137PP52743 207 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 ARPC4P59998 168 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 MRPS10P82664 201 aaKnown RBP6.75□□□□□ -1.33
VRK3-211ENST00000596445 IL18Q14116 193 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 SLC9A3R2Q15599 337 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 LRRC75BQ2VPJ9 315 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 PYHIN1Q6K0P9 492 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 CCDC144NLQ6NUI1 221 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 TMEM86BQ8N661 226 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 ZDHHC22Q8N966 263 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 OR5AP2Q8NGF4 316 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 SNAPC3Q92966 411 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 TOMM40LQ969M1 308 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 ST6GALNAC6Q969X2 333 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 RPEQ96AT9 228 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 SSX3Q99909 188 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 SOSTQ9BQB4 213 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 GINS4Q9BRT9 223 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 PARP12Q9H0J9 701 aaKnown RBP6.75□□□□□ -1.33
VRK3-211ENST00000596445 C11orf54Q9H0W9 315 aaPredicted RBP6.75□□□□□ -1.33
VRK3-211ENST00000596445 GHITMQ9H3K2 345 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 RDH8Q9NYR8 311 aa6.75□□□□□ -1.33
VRK3-211ENST00000596445 BTBD17A6NE02 478 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 FABP12A6NFH5 140 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 GABARAPH6UMI1 98 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 HSD17B6O14756 317 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 RAB29O14966 203 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 CTDSPLO15194 276 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 LANCL1O43813 399 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 IGHV4-59P01825 116 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 GAPDHP04406 335 aaKnown RBP6.74□□□□□ -1.33
VRK3-211ENST00000596445 FCER2P06734 321 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 RCVRNP35243 200 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 TAS2R46P59540 309 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 UBA52P62987 128 aaKnown RBP6.74□□□□□ -1.33
VRK3-211ENST00000596445 ZNF816Q0VGE8 651 aaPredicted RBP6.74□□□□□ -1.33
VRK3-211ENST00000596445 DIAPH2-AS1Q14236 149 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 PLA1AQ53H76 456 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 CCDC190Q86UF4 302 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 ODF3L1Q8IXM7 274 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 H1FOOQ8IZA3 346 aaPredicted RBP6.74□□□□□ -1.33
VRK3-211ENST00000596445 OR8H3Q8N146 312 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 LYG1Q8N1E2 194 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 OR52I2Q8NH67 350 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 OR5R1Q8NH85 324 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 FAM216AQ8WUB2 273 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 FCAMRQ8WWV6 532 aa6.74□□□□□ -1.33
VRK3-211ENST00000596445 AGMATQ9BSE5 352 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms