RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TMBIM6P55061 237 aa20.73■□□□□ 0.91
TRIM28-204ENST00000594806 C12orf54Q6X4T0 127 aa20.73■□□□□ 0.91
TRIM28-204ENST00000594806 THNSL2Q86YJ6 484 aa20.73■□□□□ 0.91
TRIM28-204ENST00000594806 OR4A4PQ8NGN8 299 aa20.73■□□□□ 0.91
TRIM28-204ENST00000594806 ABHD14AQ9BUJ0 271 aa20.73■□□□□ 0.91
TRIM28-204ENST00000594806 GHITMQ9H3K2 345 aa20.73■□□□□ 0.91
TRIM28-204ENST00000594806 MMP24Q9Y5R2 645 aa20.73■□□□□ 0.91
TRIM28-204ENST00000594806 HSD17B6O14756 317 aa20.72■□□□□ 0.91
TRIM28-204ENST00000594806 TXNL1O43396 289 aa20.72■□□□□ 0.91
TRIM28-204ENST00000594806 PPP1CCP36873 323 aaKnown RBP20.72■□□□□ 0.91
TRIM28-204ENST00000594806 C16orf82Q7Z2V1 217 aa20.72■□□□□ 0.91
TRIM28-204ENST00000594806 CLVS1Q8IUQ0 354 aaPredicted RBP20.72■□□□□ 0.91
TRIM28-204ENST00000594806 OR2AK2Q8NG84 335 aa20.72■□□□□ 0.91
TRIM28-204ENST00000594806 AP3S1Q92572 193 aa20.72■□□□□ 0.91
TRIM28-204ENST00000594806 ST6GALNAC6Q969X2 333 aa20.72■□□□□ 0.91
TRIM28-204ENST00000594806 HSPA12AO43301 675 aa20.71■□□□□ 0.91
TRIM28-204ENST00000594806 SCTP09683 121 aa20.71■□□□□ 0.91
TRIM28-204ENST00000594806 RAG2P55895 527 aa20.71■□□□□ 0.91
TRIM28-204ENST00000594806 GNG2P59768 71 aa20.71■□□□□ 0.91
TRIM28-204ENST00000594806 GNMTQ14749 295 aa20.71■□□□□ 0.91
TRIM28-204ENST00000594806 AWAT1Q58HT5 328 aa20.71■□□□□ 0.91
TRIM28-204ENST00000594806 FAM53AQ6NSI3 398 aaPredicted RBP20.71■□□□□ 0.91
TRIM28-204ENST00000594806 SAMD12Q8N8I0 201 aa20.71■□□□□ 0.91
TRIM28-204ENST00000594806 EDARADDQ8WWZ3 215 aa20.71■□□□□ 0.91
TRIM28-204ENST00000594806 RANBP3Q9H6Z4 567 aaPredicted RBP20.71■□□□□ 0.91
TRIM28-204ENST00000594806 BEX1Q9HBH7 125 aa20.71■□□□□ 0.91
TRIM28-204ENST00000594806 TRAV18A0A075B6X5 111 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 A0A1W2PPI3 338 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 TMEM235A6NFC5 223 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 FAM90A9PA6NNJ1 464 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 SLC31A2O15432 143 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 FABP7O15540 132 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 XRCC3O43542 346 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 TSPAN9O75954 239 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 FAM106CPP0CH98 169 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 MZT2AQ6P582 158 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 C5orf24Q7Z6I8 188 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 AKR1E2Q96JD6 320 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 NPFFR1Q9GZQ6 430 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 TOLLIPQ9H0E2 274 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 SLC23A1Q9UHI7 598 aa20.7■□□□□ 0.9
TRIM28-204ENST00000594806 ZNF182P17025 639 aaPredicted RBP20.69■□□□□ 0.9
TRIM28-204ENST00000594806 HABP2Q14520 560 aaPredicted RBP20.69■□□□□ 0.9
TRIM28-204ENST00000594806 C16orf95Q9H693 158 aa20.69■□□□□ 0.9
TRIM28-204ENST00000594806 IGHV1-3A0A0C4DH29 117 aa20.68■□□□□ 0.9
TRIM28-204ENST00000594806 TIMM23O14925 209 aa20.68■□□□□ 0.9
TRIM28-204ENST00000594806 LANCL1O43813 399 aa20.68■□□□□ 0.9
TRIM28-204ENST00000594806 NOL3O60936 208 aaKnown RBP20.68■□□□□ 0.9
TRIM28-204ENST00000594806 CEACAM6P40199 344 aa20.68■□□□□ 0.9
TRIM28-204ENST00000594806 RELBQ01201 579 aa20.68■□□□□ 0.9
TRIM28-204ENST00000594806 CCBE1Q6UXH8 406 aaPredicted RBP20.68■□□□□ 0.9
TRIM28-204ENST00000594806 LYG1Q8N1E2 194 aa20.68■□□□□ 0.9
TRIM28-204ENST00000594806 RTN4IP1Q8WWV3 396 aaPredicted RBP20.68■□□□□ 0.9
TRIM28-204ENST00000594806 CABLES2Q9BTV7 478 aa20.68■□□□□ 0.9
TRIM28-204ENST00000594806 PIPOXQ9P0Z9 390 aa20.68■□□□□ 0.9
TRIM28-204ENST00000594806 APOA1P02647 267 aa20.67■□□□□ 0.9
TRIM28-204ENST00000594806 DIAPH2-AS1Q14236 149 aa20.67■□□□□ 0.9
TRIM28-204ENST00000594806 FAM71F2Q6NXP2 309 aa20.67■□□□□ 0.9
TRIM28-204ENST00000594806 Q6ZSV7 163 aa20.67■□□□□ 0.9
TRIM28-204ENST00000594806 TGIF2LXQ8IUE1 241 aa20.67■□□□□ 0.9
TRIM28-204ENST00000594806 DRAM1Q8N682 238 aa20.67■□□□□ 0.9
TRIM28-204ENST00000594806 CFHR4Q92496 578 aa20.67■□□□□ 0.9
TRIM28-204ENST00000594806 AUNIPQ9H7T9 357 aa20.67■□□□□ 0.9
TRIM28-204ENST00000594806 COMMD3Q9UBI1 195 aa20.67■□□□□ 0.9
TRIM28-204ENST00000594806 ZNF230Q9UIE0 474 aaPredicted RBP20.67■□□□□ 0.9
TRIM28-204ENST00000594806 ELF5Q9UKW6 265 aaPredicted RBP20.67■□□□□ 0.9
TRIM28-204ENST00000594806 CLPSL1A2RUU4 121 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 CHST1O43916 411 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 CTXN2P0C2S0 81 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 GSTT2P0CG29 244 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 GSTT2BP0CG30 244 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 SOX6P35712 828 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 MOB3BQ86TA1 216 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 OR4C13Q8NGP0 309 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 OR10J5Q8NHC4 309 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 NUDCD2Q8WVJ2 157 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 CAPSLQ8WWF8 208 aa20.66■□□□□ 0.9
TRIM28-204ENST00000594806 TRBV6-7A0A0A0MS04 114 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 IGKV1-6A0A0C4DH72 117 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 SMIM31A0A1B0GVY4 71 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 RAB29O14966 203 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 OR2F2O95006 317 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 CD1BP29016 333 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 CBX5P45973 191 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 HERPUD1Q15011 391 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 TMEM69Q5SWH9 247 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 TMEM219Q86XT9 240 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 ODF3L1Q8IXM7 274 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 C3orf56Q8N813 242 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 OR56B4Q8NH76 319 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 RBM14Q96PK6 669 aaKnown RBP20.65■□□□□ 0.9
TRIM28-204ENST00000594806 ST6GALNAC5Q9BVH7 336 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 IFI27L2Q9H2X8 130 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 OR1A1Q9P1Q5 309 aa20.65■□□□□ 0.9
TRIM28-204ENST00000594806 M0QZK8 103 aa20.64■□□□□ 0.89
TRIM28-204ENST00000594806 MDKP21741 143 aaPredicted RBP20.64■□□□□ 0.89
TRIM28-204ENST00000594806 EBI3Q14213 229 aa20.64■□□□□ 0.89
TRIM28-204ENST00000594806 C11orf88Q6PI97 169 aa20.64■□□□□ 0.89
TRIM28-204ENST00000594806 IZUMO1Q8IYV9 350 aa20.64■□□□□ 0.89
TRIM28-204ENST00000594806 S1PR3Q99500 378 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms