RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	CHST4	Q8NCG5	386 aa		10.56	□□□□□ -0.72
NPC1-212	ENST00000591107	OR10R2	Q8NGX6	335 aa		10.56	□□□□□ -0.72
NPC1-212	ENST00000591107	CLEC7A	Q9BXN2	247 aa		10.56	□□□□□ -0.72
NPC1-212	ENST00000591107	TMEM133	Q9H2Q1	129 aa		10.56	□□□□□ -0.72
NPC1-212	ENST00000591107	ZNF581	Q9P0T4	197 aa		10.56	□□□□□ -0.72
NPC1-212	ENST00000591107	MRPS7	Q9Y2R9	242 aa	Known RBP	10.56	□□□□□ -0.72
NPC1-212	ENST00000591107	TCRBV4S1A1T	A0A5B7	111 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	hADV38S2	A0JD32	116 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.55	□□□□□ -0.72
NPC1-212	ENST00000591107		J3QRK9	145 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	RBP4	P02753	201 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	PTBP1	P26599	531 aa	Known RBP eCLIP	10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	BLVRB	P30043	206 aa	Predicted RBP	10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	IL13RA2	Q14627	380 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	PYDC2	Q56P42	97 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	RNASE12	Q5GAN4	147 aa	Known RBP	10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	C9orf152	Q5JTZ5	239 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	NKAPL	Q5M9Q1	402 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	SNX29P2	Q8IUI4	249 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	CYYR1	Q96J86	154 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	SNX22	Q96L94	193 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	SLC25A33	Q9BSK2	321 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	SRR	Q9GZT4	340 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	ZNF286A	Q9HBT8	521 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	LINC00312	Q9Y6C7	94 aa		10.55	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A10P	A6NDY2	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A18P	A6NE21	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A16P	A6NEW6	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A20P	A6NIJ5	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A7P	A6NKC0	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A22P	A8MWA6	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A12P	A8MX19	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A5P	A8MXJ8	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A23P	A8MXZ1	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	OR7C1	O76099	320 aa	Predicted RBP	10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	HLA-DQB1	P01920	261 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A15P	P0C7V4	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A13P	P0C7W8	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A14P	P0C7W9	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	FAM90A24P	P0C7X0	464 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	PTHLH	P12272	177 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	MNDA	P41218	407 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	DYNLT3	P51808	116 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	P2RX3	P56373	397 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	TMEM50B	P56557	158 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	PITPNA	Q00169	270 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	SCN1B	Q07699	218 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	MPV17L	Q2QL34	196 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	PLAC9	Q5JTB6	97 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	ATAD3C	Q5T2N8	411 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	MINOS1	Q5TGZ0	78 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	SIGIRR	Q6IA17	410 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	C18orf65	Q6ZTR6	163 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	LINC00596	Q86U02	117 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	RAB3C	Q96E17	227 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	ARHGAP5-AS1	Q96IT6	56 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	ABHD1	Q96SE0	405 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	PECR	Q9BY49	303 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	AUNIP	Q9H7T9	357 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	RABL2B	Q9UNT1	228 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	MINOS1-NBL1	R4GNA1	71 aa		10.54	□□□□□ -0.72
NPC1-212	ENST00000591107	TMEM235	A6NFC5	223 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	MFNG	O00587	321 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	IGHV3-7	P01780	117 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	AMY1A	P04745	511 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	AMY2A	P04746	511 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	ZNF44	P15621	663 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	HIST1H1D	P16402	221 aa	Known RBP	10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	GNB3	P16520	340 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	HTR1D	P28221	377 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	CHAT	P28329	748 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	CD40LG	P29965	261 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	GLIPR1	P48060	266 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	PPP5C	P53041	499 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	MEF2C	Q06413	473 aa	Predicted RBP	10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	RBM39	Q14498	530 aa	Known RBP	10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	ZNF260	Q3ZCT1	412 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	CDNF	Q49AH0	187 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	SPIN3	Q5JUX0	258 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	C6orf201	Q7Z4U5	140 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	ABHD12	Q8N2K0	398 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	NEDD4L	Q96PU5	975 aa		10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	SDHC	Q99643	169 aa	Predicted RBP	10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	ELF5	Q9UKW6	265 aa	Predicted RBP	10.53	□□□□□ -0.72
NPC1-212	ENST00000591107	HSPB6	O14558	160 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	SH2D1B	O14796	132 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	DEGS1	O15121	323 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	PDCD6	O75340	191 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	TPPP	O94811	219 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	OR2H2	O95918	312 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	FUT3	P21217	361 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	DGCR2	P98153	550 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	AES	Q08117	197 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	ZNF146	Q15072	292 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	DEFB121	Q5J5C9	76 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107	VAX1	Q5SQQ9	334 aa		10.52	□□□□□ -0.73
NPC1-212	ENST00000591107		Q6P435	159 aa		10.52	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms