RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 TNRC18O15417 2968 aaPredicted RBP13□□□□□ -0.33
CIRBP-228ENST00000590347 RALGAPA1Q6GYQ0 2036 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 KCNK17Q96T54 332 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 NUDT16L1Q9BRJ7 211 aaKnown RBP13□□□□□ -0.33
CIRBP-228ENST00000590347 CCL28Q9NRJ3 127 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 B4DGG1 531 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 ZNF16P17020 682 aaPredicted RBP12.99□□□□□ -0.33
CIRBP-228ENST00000590347 TNFRSF4P43489 277 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 AMTP48728 403 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 RPL19P84098 196 aaKnown RBP12.99□□□□□ -0.33
CIRBP-228ENST00000590347 HLA-BQ31612 363 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 DNM1P34Q6PK57 102 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 TMEM108Q6UXF1 575 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 OR10G4Q8NGN3 311 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 BAHD1Q8TBE0 780 aaPredicted RBP12.99□□□□□ -0.33
CIRBP-228ENST00000590347 ORAOV1Q8WV07 137 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 BCL2L2Q92843 193 aaPredicted RBP12.99□□□□□ -0.33
CIRBP-228ENST00000590347 SLC46A1Q96NT5 459 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 ZNF576Q9H609 170 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 TAAR3PQ9P1P4 343 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 TBL2Q9Y4P3 447 aaKnown RBP12.99□□□□□ -0.33
CIRBP-228ENST00000590347 RAB29O14966 203 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 SAP30O75446 220 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 WNT2P09544 360 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 IER3P46695 156 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 PSMB3P49720 205 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 PSG4Q00888 419 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 RAB30Q15771 203 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 Q6ZRM9 215 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 ZNF295-AS1Q8N0V1 137 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 SIGLECL1Q8N7X8 197 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 OR5D13Q8NGL4 314 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 OR4C12Q96R67 309 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 RNF2Q99496 336 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 CST9LQ9H4G1 147 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 MUC22E2RYF6 1773 aaPredicted RBP12.99□□□□□ -0.33
CIRBP-228ENST00000590347 ATG2AQ2TAZ0 1938 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 DUXBA0A1W2PPF3 345 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 ZNF891A8MT65 544 aaPredicted RBP12.99□□□□□ -0.33
CIRBP-228ENST00000590347 RBFOX2O43251 390 aaKnown RBP eCLIP12.99□□□□□ -0.333e-24■■□□□ 13.9
CIRBP-228ENST00000590347 IGLC2P0DOY2 106 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 IGLC3P0DOY3 106 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 GABRG2P18507 467 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 KIR2DS3Q14952 304 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 SGCZQ96LD1 299 aa12.99□□□□□ -0.33
CIRBP-228ENST00000590347 A0A1W2PNR3 127 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 J3QW42 95 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 K7EP13 123 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 OR7C1O76099 320 aaPredicted RBP12.98□□□□□ -0.33
CIRBP-228ENST00000590347 NDUFB4O95168 129 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 IFNA1P01562 189 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 CLPSP04118 112 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 CLRN1P58418 232 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 EIF3IQ13347 325 aaKnown RBP12.98□□□□□ -0.33
CIRBP-228ENST00000590347 HAPLN4Q86UW8 402 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 HNRNPA2B1P22626 353 aaKnown RBP12.98□□□□□ -0.33
CIRBP-228ENST00000590347 ATP5G3P48201 142 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 OCIAD2Q56VL3 154 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 Q96M66 194 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 RCHY1Q96PM5 261 aa12.98□□□□□ -0.33
CIRBP-228ENST00000590347 YLPM1P49750 1951 aaKnown RBP12.98□□□□□ -0.33
CIRBP-228ENST00000590347 ACSM6Q6P461 480 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 LRTM2Q8N967 370 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 CSTL1Q9H114 145 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 PLCXD2Q0VAA5 305 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 CCDC71LQ8N9Z2 235 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 OR5P3Q8WZ94 311 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 MRPL18Q9H0U6 180 aaKnown RBP12.97□□□□□ -0.33
CIRBP-228ENST00000590347 UQCR10Q9UDW1 63 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 ABCA7Q8IZY2 2146 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 IGHV2OR16-5A0A0B4J2B6 119 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 OR2T8A6NH00 312 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 SCTP09683 121 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 GFRA1P56159 465 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 RANP62826 216 aaKnown RBP12.97□□□□□ -0.33
CIRBP-228ENST00000590347 ZXDAP98168 799 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 OR4A47Q6IF82 309 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 GCNT2Q8N0V5 402 aa12.97□□□□□ -0.33
CIRBP-228ENST00000590347 IGHV3-20A0A0C4DH32 117 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 FCN1O00602 326 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 MT-ATP6P00846 226 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 OTX1P32242 354 aaPredicted RBP12.96□□□□□ -0.33
CIRBP-228ENST00000590347 ECI1P42126 302 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 LHX2P50458 406 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 BAXQ07812 192 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 FUT7Q11130 342 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 ZP4Q12836 540 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 MYBPHQ13203 477 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 SPINK9Q5DT21 86 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 GCSAMLQ5JQS6 135 aa12.96□□□□□ -0.33
CIRBP-228ENST00000590347 IGKV1-27A0A075B6S5 117 aa12.96□□□□□ -0.34
CIRBP-228ENST00000590347 TRAV1-1A0A0B4J248 108 aa12.96□□□□□ -0.34
CIRBP-228ENST00000590347 TRAV39A0A0B4J263 110 aa12.96□□□□□ -0.34
CIRBP-228ENST00000590347 ID3Q02535 119 aa12.96□□□□□ -0.34
CIRBP-228ENST00000590347 DOK3Q7L591 496 aa12.96□□□□□ -0.34
CIRBP-228ENST00000590347 C9orf40Q8IXQ3 194 aa12.96□□□□□ -0.34
CIRBP-228ENST00000590347 SLC22A18ASQ8N1D0 253 aa12.96□□□□□ -0.34
CIRBP-228ENST00000590347 Q8N976 141 aa12.96□□□□□ -0.34
CIRBP-228ENST00000590347 GPR146Q96CH1 333 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms