RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 RAB11BQ15907 218 aa16.25■□□□□ 0.19
CIRBP-226ENST00000590171 SSX1Q16384 188 aa16.25■□□□□ 0.19
CIRBP-226ENST00000590171 ZNF880Q6PDB4 577 aa16.25■□□□□ 0.19
CIRBP-226ENST00000590171 ZNF367Q7RTV3 350 aa16.25■□□□□ 0.19
CIRBP-226ENST00000590171 FOXRED2Q8IWF2 684 aa16.25■□□□□ 0.19
CIRBP-226ENST00000590171 FAM89BQ8N5H3 189 aa16.25■□□□□ 0.19
CIRBP-226ENST00000590171 WFDC9Q8NEX5 89 aa16.25■□□□□ 0.19
CIRBP-226ENST00000590171 OR51D1Q8NGF3 324 aa16.25■□□□□ 0.19
CIRBP-226ENST00000590171 S1PR3Q99500 378 aa16.25■□□□□ 0.19
CIRBP-226ENST00000590171 URM1Q9BTM9 101 aaKnown RBP16.25■□□□□ 0.19
CIRBP-226ENST00000590171 CHMP1AQ9HD42 196 aaPredicted RBP16.25■□□□□ 0.19
CIRBP-226ENST00000590171 ACOT13Q9NPJ3 140 aa16.25■□□□□ 0.19
CIRBP-226ENST00000590171 FOXI3A8MTJ6 420 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-226ENST00000590171 PF4P02776 101 aa16.24■□□□□ 0.19
CIRBP-226ENST00000590171 PRB2P02812 416 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-226ENST00000590171 GPR12P47775 334 aa16.24■□□□□ 0.19
CIRBP-226ENST00000590171 LY6G6FQ5SQ64 297 aa16.24■□□□□ 0.19
CIRBP-226ENST00000590171 STPG2Q8N412 459 aa16.24■□□□□ 0.19
CIRBP-226ENST00000590171 OR8H1Q8NGG4 311 aa16.24■□□□□ 0.19
CIRBP-226ENST00000590171 HDHD3Q9BSH5 251 aaPredicted RBP16.24■□□□□ 0.19
CIRBP-226ENST00000590171 ABRACLQ9P1F3 81 aa16.24■□□□□ 0.19
CIRBP-226ENST00000590171 AK3Q9UIJ7 227 aa16.24■□□□□ 0.19
CIRBP-226ENST00000590171 LRRC42Q9Y546 428 aa16.24■□□□□ 0.19
CIRBP-226ENST00000590171 RGS11O94810 467 aa16.23■□□□□ 0.19
CIRBP-226ENST00000590171 CD33P20138 364 aa16.23■□□□□ 0.19
CIRBP-226ENST00000590171 FAM71E2Q8N5Q1 922 aa16.23■□□□□ 0.19
CIRBP-226ENST00000590171 SETD6Q8TBK2 473 aa16.23■□□□□ 0.19
CIRBP-226ENST00000590171 IL1F10Q8WWZ1 152 aa16.23■□□□□ 0.19
CIRBP-226ENST00000590171 MRPL20Q9BYC9 149 aaKnown RBP16.23■□□□□ 0.19
CIRBP-226ENST00000590171 V9GY05 133 aa16.23■□□□□ 0.19
CIRBP-226ENST00000590171 AP4M1O00189 453 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 IGLL1P15814 213 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 F2RL1P55085 397 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 TMEM50BP56557 158 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 SLC35B1P78383 322 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 ZNF833PQ6ZTB9 187 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 MOB1BQ7L9L4 216 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 OR2AK2Q8NG84 335 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 PHF21AQ96BD5 680 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 FAM3DQ96BQ1 224 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 RASL11BQ9BPW5 248 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 NABP2Q9BQ15 211 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 HSPB9Q9BQS6 159 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 IFI27L2Q9H2X8 130 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 HSF4Q9ULV5 492 aa16.22■□□□□ 0.19
CIRBP-226ENST00000590171 SAA2-SAA4A0A096LPE2 208 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 TRBV6-6A0A0A6YYG2 114 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 SHISA3A0PJX4 238 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 LDLRAD4O15165 306 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 SAA2P0DJI9 122 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-226ENST00000590171 OR3A3P47888 321 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 VEGFCP49767 419 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 RPL23AP62750 156 aaKnown RBP16.21■□□□□ 0.19
CIRBP-226ENST00000590171 PLA2G7Q13093 441 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 C2orf76Q3KRA6 126 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 HES5Q5TA89 166 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 RIMS4Q9H426 269 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-226ENST00000590171 NDUFB11Q9NX14 153 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 STEAP1Q9UHE8 339 aa16.21■□□□□ 0.19
CIRBP-226ENST00000590171 ST8SIA5O15466 376 aa16.2■□□□□ 0.18
CIRBP-226ENST00000590171 OR10A3P58181 314 aa16.2■□□□□ 0.18
CIRBP-226ENST00000590171 GABARAPL2P60520 117 aa16.2■□□□□ 0.18
CIRBP-226ENST00000590171 HLA-DRB3P79483 266 aa16.2■□□□□ 0.18
CIRBP-226ENST00000590171 CD200R1LQ6Q8B3 271 aa16.2■□□□□ 0.18
CIRBP-226ENST00000590171 ETV3LQ6ZN32 361 aa16.2■□□□□ 0.18
CIRBP-226ENST00000590171 C18orf65Q6ZTR6 163 aa16.2■□□□□ 0.18
CIRBP-226ENST00000590171 ARHGAP5-AS1Q96IT6 56 aa16.2■□□□□ 0.18
CIRBP-226ENST00000590171 PECRQ9BY49 303 aa16.2■□□□□ 0.18
CIRBP-226ENST00000590171 PARP12Q9H0J9 701 aaKnown RBP16.2■□□□□ 0.18
CIRBP-226ENST00000590171 C12orf4Q9NQ89 552 aa16.2■□□□□ 0.18
CIRBP-226ENST00000590171 TMEM272A0A1B0GTI8 110 aa16.19■□□□□ 0.18
CIRBP-226ENST00000590171 DENRO43583 198 aaKnown RBP16.19■□□□□ 0.18
CIRBP-226ENST00000590171 PSMD7P51665 324 aa16.19■□□□□ 0.18
CIRBP-226ENST00000590171 MMDQ15546 238 aa16.19■□□□□ 0.18
CIRBP-226ENST00000590171 PLAC9Q5JTB6 97 aa16.19■□□□□ 0.18
CIRBP-226ENST00000590171 COMMD1Q8N668 190 aa16.19■□□□□ 0.18
CIRBP-226ENST00000590171 RITA1Q96K30 269 aa16.19■□□□□ 0.18
CIRBP-226ENST00000590171 ZNF251Q9BRH9 671 aa16.19■□□□□ 0.18
CIRBP-226ENST00000590171 OR1A1Q9P1Q5 309 aa16.19■□□□□ 0.18
CIRBP-226ENST00000590171 TRAV1-2A0A0B4J238 106 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 SLC2A2P11168 524 aaPredicted RBP16.18■□□□□ 0.18
CIRBP-226ENST00000590171 SOX6P35712 828 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 ACTBP60709 375 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 FOXB2Q5VYV0 432 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 C8orf86Q6ZUL3 223 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 LINC00482Q8N8I6 264 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 OR56B1Q8NGI3 324 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 Q9N2K0 584 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 ZFP57Q9NU63 452 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 NECAP2Q9NVZ3 263 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 SLC23A1Q9UHI7 598 aa16.18■□□□□ 0.18
CIRBP-226ENST00000590171 TRDV1A0A1B0GX56 115 aa16.17■□□□□ 0.18
CIRBP-226ENST00000590171 PDCD5O14737 125 aa16.17■□□□□ 0.18
CIRBP-226ENST00000590171 RRP9O43818 475 aaKnown RBP16.17■□□□□ 0.18
CIRBP-226ENST00000590171 MRPS14O60783 128 aaKnown RBP16.17■□□□□ 0.18
CIRBP-226ENST00000590171 SCTP09683 121 aa16.17■□□□□ 0.18
CIRBP-226ENST00000590171 CNTFRP26992 372 aa16.17■□□□□ 0.18
CIRBP-226ENST00000590171 THBS3P49746 956 aa16.17■□□□□ 0.18
CIRBP-226ENST00000590171 PNLIPRP3Q17RR3 467 aa16.17■□□□□ 0.18
CIRBP-226ENST00000590171 RPL39P5Q59GN2 51 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms