RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 TMEM210A6NLX4 147 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 DEFB108AA8MXU0 73 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SDCBPO00560 298 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 GEMIN2O14893 280 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SOCS1O15524 211 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 MLNRO43193 412 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ARL6IP5O75915 188 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 DYSFO75923 2080 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 NXPH2O95156 264 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 GABARAPO95166 117 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 APOA1P02647 267 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 EIF4EP06730 217 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 RPA2P15927 270 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ELK1P19419 428 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TNCP24821 2201 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 CD80P33681 288 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 RPL35P42766 123 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 HOXA1P49639 335 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ASCL1P50553 236 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TLE4Q04727 773 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF154Q13106 437 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ARFRP1Q13795 201 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 FAM189A2Q15884 450 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 PCK2Q16822 640 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 C2orf76Q3KRA6 126 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 TIMM50Q3ZCQ8 353 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF404Q494X3 552 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 PHLDA2Q53GA4 152 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 YIF1BQ5BJH7 314 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF57Q68EA5 555 aaPredicted RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR52W1Q6IF63 320 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF544Q6NX49 715 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 C18orf65Q6ZTR6 163 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 SYS1Q8N2H4 156 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 MS4A15Q8N5U1 240 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 UXS1Q8NBZ7 420 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR4S1Q8NGB4 309 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR4M2Q8NGB6 313 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR51T1Q8NGJ9 327 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 OR4K15Q8NH41 348 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 H1FXQ92522 213 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 FCGR1BQ92637 280 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 LEAP2Q969E1 77 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 ST6GALNAC5Q9BVH7 336 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 YTHDF1Q9BYJ9 559 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 PPA2Q9H2U2 334 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 C1orf123Q9NWV4 160 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 KLK11Q9UBX7 282 aa2.71□□□□□ -1.98
ZNF540-207ENST00000589285 MRPS28Q9Y2Q9 187 aaKnown RBP2.71□□□□□ -1.98
ZNF540-207ENST00000589285 A0A087X0M5 115 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 IGHV3-43A0A0B4J1X8 118 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 A0A1B0GX30 115 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 MEIOCA2RUB1 952 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 FABP12A6NFH5 140 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 E9PQ18 207 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 M0R233 179 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 SPINT2O43291 252 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 CLDN1O95832 211 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 IGF2P01344 180 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 IGKV3-15P01624 115 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 UBCP0CG48 685 aaKnown RBP2.7□□□□□ -1.98
ZNF540-207ENST00000589285 IGHV3-43DP0DP04 118 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 CBR1P16152 277 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 COX5AP20674 150 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 BCL3P20749 454 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 CHATP28329 748 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 CD40LGP29965 261 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 BLVRBP30043 206 aaPredicted RBP2.7□□□□□ -1.98
ZNF540-207ENST00000589285 INPP1P49441 399 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 RBP2P50120 134 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 RORCP51449 518 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 RIPPLY3P57055 190 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 TAS2R43P59537 309 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 RAB4BP61018 213 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 MAB21L1Q13394 359 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 GUSBP1Q15486 140 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 ADIPOQQ15848 244 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 DGUOKQ16854 277 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 TEX30Q5JUR7 227 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 SLC25A30Q5SVS4 291 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 CNIH2Q6PI25 160 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 MUC20Q8N307 709 aaPredicted RBP2.7□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF525Q8N782 197 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 OR52H1Q8NGJ2 320 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 OR6F1Q8NGZ6 308 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 NANPQ8TBE9 248 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 HPSE2Q8WWQ2 592 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 EMG1Q92979 244 aaKnown RBP2.7□□□□□ -1.98
ZNF540-207ENST00000589285 RNASE6Q93091 150 aaKnown RBP2.7□□□□□ -1.98
ZNF540-207ENST00000589285 FAM3DQ96BQ1 224 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 FAAP24Q9BTP7 215 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 LINC00470Q9BZP3 86 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 FGF23Q9GZV9 251 aaPredicted RBP2.7□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF442Q9H7R0 627 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 IFT46Q9NQC8 304 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 TMEM100Q9NV29 134 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 PURGQ9UJV8 347 aaKnown RBP2.7□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF221Q9UK13 617 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 SLC7A11Q9UPY5 501 aa2.7□□□□□ -1.98
ZNF540-207ENST00000589285 PPP1R3CQ9UQK1 317 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms