RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, human

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-206	ENST00000589055	RITA1	Q96K30	269 aa		12.56	□□□□□ -0.4
TMEM259-206	ENST00000589055	TM2D1	Q9BX74	207 aa		12.56	□□□□□ -0.4
TMEM259-206	ENST00000589055	PARP12	Q9H0J9	701 aa	Known RBP	12.56	□□□□□ -0.4
TMEM259-206	ENST00000589055	RAB9B	Q9NP90	201 aa		12.56	□□□□□ -0.4
TMEM259-206	ENST00000589055	JPT1	Q9UK76	154 aa		12.56	□□□□□ -0.4
TMEM259-206	ENST00000589055	AP4M1	O00189	453 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	ST8SIA5	O15466	376 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	SOCS1	O15524	211 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	TXNL1	O43396	289 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	LANCL1	O43813	399 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	BPNT1	O95861	308 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	RPLP1	P05386	114 aa	Known RBP	12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	CD37	P11049	281 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	CRHBP	P24387	322 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	BLVRB	P30043	206 aa	Predicted RBP	12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	HOXD3	P31249	432 aa	Predicted RBP	12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	KRTAP10-11	P60412	298 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	PLA2G7	Q13093	441 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	TPBG	Q13641	420 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	REC114	Q7Z4M0	266 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	OR6M1	Q8NGM8	313 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	IL1F10	Q8WWZ1	152 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	RASL11B	Q9BPW5	248 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	LPAR5	Q9H1C0	372 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	IFI27L2	Q9H2X8	130 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	PLGRKT	Q9HBL7	147 aa		12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	CHMP1A	Q9HD42	196 aa	Predicted RBP	12.55	□□□□□ -0.4
TMEM259-206	ENST00000589055	SAA2-SAA4	A0A096LPE2	208 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	NAPSA	O96009	420 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	SAA2	P0DJI9	122 aa	Predicted RBP	12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	THBS3	P49746	956 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	SLC35B1	P78383	322 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	HTD2	P86397	168 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	FABP5	Q01469	135 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	MLLT11	Q13015	90 aa	Predicted RBP	12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	MMD	Q15546	238 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	DEFB136	Q30KP8	78 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	ZNF554	Q86TJ5	538 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	RCC1L	Q96I51	464 aa	Known RBP	12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	CNBD2	Q96M20	576 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	NABP2	Q9BQ15	211 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055	AK3	Q9UIJ7	227 aa		12.54	□□□□□ -0.4
TMEM259-206	ENST00000589055		K7EIL1	84 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	SLC17A2	O00624	439 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	YPEL1	O60688	119 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	ARSB	P15848	533 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	CPE	P16870	476 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	CALR	P27797	417 aa	Known RBP	12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	STEAP3	Q658P3	488 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	ZNF880	Q6PDB4	577 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	ZNF833P	Q6ZTB9	187 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	PRSS48	Q7RTY5	328 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	OR51D1	Q8NGF3	324 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	GALM	Q96C23	342 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	YPEL2	Q96QA6	119 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	MGLL	Q99685	303 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	PLEKHJ1	Q9NW61	149 aa		12.53	□□□□□ -0.4
TMEM259-206	ENST00000589055	FOXI3	A8MTJ6	420 aa	Predicted RBP	12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	SOX6	P35712	828 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	ACTB	P60709	375 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	CFHR3	Q02985	330 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	RAB11B	Q15907	218 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	SSX1	Q16384	188 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	PNLIPRP3	Q17RR3	467 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	RPL39P5	Q59GN2	51 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	GLDN	Q6ZMI3	551 aa	Predicted RBP	12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	ZNF695	Q8IW36	515 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	OR2AK2	Q8NG84	335 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	OR8H1	Q8NGG4	311 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	RAX2	Q96IS3	184 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	ISYNA1	Q9NPH2	558 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	ABRACL	Q9P1F3	81 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	OR1A1	Q9P1Q5	309 aa		12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	ZNF107	Q9UII5	783 aa	Predicted RBP	12.52	□□□□□ -0.41
TMEM259-206	ENST00000589055	WI2-2373I1.2	A0A1W2PRP0	233 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	VEGFC	P49767	419 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	TMEM50B	P56557	158 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	VAX1	Q5SQQ9	334 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	HES5	Q5TA89	166 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	TEX38	Q6PEX7	206 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	COMMD1	Q8N668	190 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	ARHGAP5-AS1	Q96IT6	56 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	ABHD14B	Q96IU4	210 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	KCTD7	Q96MP8	289 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	P2RX4	Q99571	388 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	ZNF251	Q9BRH9	671 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	ZFP57	Q9NU63	452 aa		12.51	□□□□□ -0.41
TMEM259-206	ENST00000589055	SHISA3	A0PJX4	238 aa		12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055		G3V318	75 aa		12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	RRP9	O43818	475 aa	Known RBP	12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	ARL6IP5	O75915	188 aa		12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	RGS11	O94810	467 aa		12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	SNRPB	P14678	240 aa	Known RBP	12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	VDAC1	P21796	283 aa		12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	RAB25	P57735	213 aa		12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	OR10A3	P58181	314 aa		12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	HLA-DRB3	P79483	266 aa		12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	TBCE	Q15813	527 aa	Predicted RBP	12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.5	□□□□□ -0.41
TMEM259-206	ENST00000589055	FAM131A	Q6UXB0	335 aa		12.5	□□□□□ -0.41

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