RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 OR4X2Q8NGF9 303 aa8.7□□□□□ -1.02
CLIP3-203ENST00000586457 OR10R2Q8NGX6 335 aa8.7□□□□□ -1.02
CLIP3-203ENST00000586457 CT45A3Q8NHU0 189 aa8.7□□□□□ -1.02
CLIP3-203ENST00000586457 EDARADDQ8WWZ3 215 aa8.7□□□□□ -1.02
CLIP3-203ENST00000586457 GHITMQ9H3K2 345 aa8.7□□□□□ -1.02
CLIP3-203ENST00000586457 SERTAD4Q9NUC0 356 aa8.7□□□□□ -1.02
CLIP3-203ENST00000586457 PIPOXQ9P0Z9 390 aa8.7□□□□□ -1.02
CLIP3-203ENST00000586457 SLC23A1Q9UHI7 598 aa8.7□□□□□ -1.02
CLIP3-203ENST00000586457 DAPK2Q9UIK4 370 aa8.7□□□□□ -1.02
CLIP3-203ENST00000586457 TCRBV4S1A1TA0A5B7 111 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 SMIM30A4D0T7 59 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 TRDCB7Z8K6 153 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 RAB29O14966 203 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 SLC31A2O15432 143 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 SCGNO76038 276 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 NAPSAO96009 420 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 OPN1MWP04001 364 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 OPN1MW2P0DN77 364 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 OPN1MW3P0DN78 364 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 ZNF134P52741 427 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 MXD1Q05195 221 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 KIR2DS1Q14954 304 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 HMGN3Q15651 99 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 KHDC1LQ5JSQ8 128 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 OR8H1Q8NGG4 311 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 PTX4Q96A99 478 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 EAF1Q96JC9 268 aaPredicted RBP8.69□□□□□ -1.02
CLIP3-203ENST00000586457 GON7Q9BXV9 100 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 OR51E2Q9H255 320 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 ZNF221Q9UK13 617 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 RBM7Q9Y580 266 aaKnown RBP8.69□□□□□ -1.02
CLIP3-203ENST00000586457 DNHD1Q96M86 4753 aa8.69□□□□□ -1.02
CLIP3-203ENST00000586457 A0A0A6YYD4 124 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 FAM90A9PA6NNJ1 464 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 FGF16O43320 207 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 LANCL1O43813 399 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 CD28P10747 220 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 SLC2A2P11168 524 aaPredicted RBP8.68□□□□□ -1.02
CLIP3-203ENST00000586457 GNB3P16520 340 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 SDC2P34741 201 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 SERPINB10P48595 397 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 HLA-DRB3P79483 266 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 GNMTQ14749 295 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 LY6G6FQ5SQ64 297 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 IDNKQ5T6J7 187 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 FAM53AQ6NSI3 398 aaPredicted RBP8.68□□□□□ -1.02
CLIP3-203ENST00000586457 Q6ZS46 218 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 SLC35E3Q7Z769 313 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 ZNF439Q8NDP4 499 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 OR4F17Q8NGA8 305 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 OR10J5Q8NHC4 309 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 CFHR4Q92496 578 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 OR4F4Q96R69 305 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 ZNF251Q9BRH9 671 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 GINS4Q9BRT9 223 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 HDHD3Q9BSH5 251 aaPredicted RBP8.68□□□□□ -1.02
CLIP3-203ENST00000586457 Q9N2K0 584 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 KIAA1456Q9P272 454 aa8.68□□□□□ -1.02
CLIP3-203ENST00000586457 TRBV6-6A0A0A6YYG2 114 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 PSMB11A5LHX3 300 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 SH2D7A6NKC9 451 aaPredicted RBP8.67□□□□□ -1.02
CLIP3-203ENST00000586457 H7C2Y5 167 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 BET1O15155 118 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 KCNAB3O43448 404 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 RRP9O43818 475 aaKnown RBP8.67□□□□□ -1.02
CLIP3-203ENST00000586457 GSTP1P09211 210 aaKnown RBP8.67□□□□□ -1.02
CLIP3-203ENST00000586457 PF4V1P10720 104 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 MC5RP33032 325 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 GPR12P47775 334 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 TMEM50BP56557 158 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 PLGLAQ15195 96 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 TMEM95Q3KNT9 176 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 CDNFQ49AH0 187 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 PLAC9Q5JTB6 97 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 ZNF880Q6PDB4 577 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 NDUFA11Q86Y39 141 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 CROCCP3Q8IVE0 287 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 IZUMO1Q8IYV9 350 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 OR4A4PQ8NGN8 299 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 CHPT1Q8WUD6 406 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 ST6GALNAC6Q969X2 333 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 R3HDM4Q96D70 268 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 NBEAL1Q6ZS30 2694 aa8.67□□□□□ -1.02
CLIP3-203ENST00000586457 TET2Q6N021 2002 aaPredicted RBP8.66□□□□□ -1.02
CLIP3-203ENST00000586457 ANK2Q01484 3957 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 A0A0B4J203 849 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 A0A1W2PRX2 142 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 LDLRAD4O15165 306 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 ST8SIA5O15466 376 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 FABP7O15540 132 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 AIREO43918 545 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 SCTP09683 121 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 HIST1H1DP16402 221 aaKnown RBP8.66□□□□□ -1.02
CLIP3-203ENST00000586457 SOX6P35712 828 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 OR3A3P47888 321 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 ZNF137PP52743 207 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 GNG2P59768 71 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 PITPNAQ00169 270 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 CBX3Q13185 183 aa8.66□□□□□ -1.02
CLIP3-203ENST00000586457 EBI3Q14213 229 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms