RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 TAS2R8Q9NYW2 309 aa11.09□□□□□ -0.63
VMP1-203ENST00000586245 TBL2Q9Y4P3 447 aaKnown RBP11.09□□□□□ -0.63
VMP1-203ENST00000586245 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
VMP1-203ENST00000586245 IGLV1-47P01700 117 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 PMP2P02689 132 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 CSF1P09603 554 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 OR5H8P0DN80 308 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 EPHA1P21709 976 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 IL3RAP26951 378 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 HTR1DP28221 377 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 SAA4P35542 130 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 CEACAM3P40198 252 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 TAS2R19P59542 299 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 UTF1Q5T230 341 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 MINOS1Q5TGZ0 78 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 SLC25A48Q6ZT89 311 aaKnown RBP11.08□□□□□ -0.64
VMP1-203ENST00000586245 LINC00311Q8N616 119 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 THAP7Q9BT49 309 aaPredicted RBP11.08□□□□□ -0.64
VMP1-203ENST00000586245 ABHD14AQ9BUJ0 271 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 SRRQ9GZT4 340 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 AKIP1Q9NQ31 210 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 EHFQ9NZC4 300 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 ZNF107Q9UII5 783 aaPredicted RBP11.08□□□□□ -0.64
VMP1-203ENST00000586245 FAM96BQ9Y3D0 163 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 MINOS1-NBL1R4GNA1 71 aa11.08□□□□□ -0.64
VMP1-203ENST00000586245 A0A1W2PPE3 182 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 TBPP20226 339 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 HRH1P35367 487 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 INPP1P49441 399 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 RAB7AP51149 207 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 RNASE10Q5GAN6 216 aaKnown RBP11.07□□□□□ -0.64
VMP1-203ENST00000586245 CT45A1Q5HYN5 189 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 LYSMD2Q8IV50 215 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 MFSD4AQ8N468 514 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 TMEM229BQ8NBD8 167 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 ZNF439Q8NDP4 499 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 OR4P4Q8NGL7 312 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 CT45A3Q8NHU0 189 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 C22orf15Q8WYQ4 148 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 WDR12Q9GZL7 423 aaKnown RBP11.07□□□□□ -0.64
VMP1-203ENST00000586245 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 ZNRD1Q9P1U0 126 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 DPM3Q9P2X0 92 aa11.07□□□□□ -0.64
VMP1-203ENST00000586245 RBMX2Q9Y388 322 aaKnown RBP11.07□□□□□ -0.64
VMP1-203ENST00000586245 RBM7Q9Y580 266 aaKnown RBP11.07□□□□□ -0.64
VMP1-203ENST00000586245 LEUTXA8MZ59 168 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 BUB1B-PAK6H3BSN5 160 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 ITGB1BP1O14713 200 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 SLC31A2O15432 143 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 CRLF1O75462 422 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 CD3DP04234 171 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 IFNA6P05013 189 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 NFYAP23511 347 aaPredicted RBP11.06□□□□□ -0.64
VMP1-203ENST00000586245 RFX2P48378 723 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 ZNF134P52741 427 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 AP3S2P59780 193 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 TSPAN5P62079 268 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 DYRK1AQ13627 763 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 ZNF846Q147U1 533 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 TRIQKQ629K1 86 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 STEAP1BQ6NZ63 245 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 OVCH2Q7RTZ1 564 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 LHFPL4Q7Z7J7 247 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 H1FOOQ8IZA3 346 aaPredicted RBP11.06□□□□□ -0.64
VMP1-203ENST00000586245 LYG1Q8N1E2 194 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 MALSU1Q96EH3 234 aa11.06□□□□□ -0.64
VMP1-203ENST00000586245 C11orf54Q9H0W9 315 aaPredicted RBP11.06□□□□□ -0.64
VMP1-203ENST00000586245 A0A0U1RQK1 487 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 ANKRD20A5PA0PJZ0 165 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 M0QYG6 137 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 ST8SIA5O15466 376 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 LANCL1O43813 399 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 RAB3DO95716 219 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 FBP1P09467 338 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 AKAIN1P0CW23 69 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 FCGR2CP31995 323 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 LUMP51884 338 aaPredicted RBP11.05□□□□□ -0.64
VMP1-203ENST00000586245 MEF2DQ14814 521 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 VAX1Q5SQQ9 334 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 TPTE2P1Q5T6R2 138 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 TMEM17Q86X19 198 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 BCL6BQ8N143 479 aaPredicted RBP11.05□□□□□ -0.64
VMP1-203ENST00000586245 TOMM5Q8N4H5 51 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 OR6F1Q8NGZ6 308 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 FAM216AQ8WUB2 273 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 GIMAP1Q8WWP7 306 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 TOMM40LQ969M1 308 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 RPEQ96AT9 228 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 PARP12Q9H0J9 701 aaKnown RBP11.05□□□□□ -0.64
VMP1-203ENST00000586245 GHITMQ9H3K2 345 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 PIPOXQ9P0Z9 390 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 ZNF221Q9UK13 617 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 OR2W1Q9Y3N9 320 aa11.05□□□□□ -0.64
VMP1-203ENST00000586245 SONP18583 2426 aaKnown RBP11.04□□□□□ -0.64
VMP1-203ENST00000586245 J3QRK9 145 aa11.04□□□□□ -0.64
VMP1-203ENST00000586245 RAB29O14966 203 aa11.04□□□□□ -0.64
VMP1-203ENST00000586245 CD74P04233 296 aa11.04□□□□□ -0.64
VMP1-203ENST00000586245 OR8U9P0C7N5 309 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms