RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 FOXE3Q13461 319 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 INSL4Q14641 139 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 GLT8D1Q68CQ7 371 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 SLC16A12Q6ZSM3 486 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 LRRTM1Q86UE6 522 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 SBSPONQ8IVN8 264 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 IZUMO1Q8IYV9 350 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 LINC00311Q8N616 119 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 OR11H1Q8NG94 326 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 OR10A7Q8NGE5 316 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 OR8U1Q8NH10 309 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 RTN4IP1Q8WWV3 396 aaPredicted RBP9.06□□□□□ -0.96
LIG3-207ENST00000586119 KCTD7Q96MP8 289 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 OR5B12Q96R08 314 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 UQCC2Q9BRT2 126 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 GNB4Q9HAV0 340 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 TXNL4BQ9NX01 149 aaKnown RBP9.06□□□□□ -0.96
LIG3-207ENST00000586119 GFOD1Q9NXC2 390 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 WSB1Q9Y6I7 421 aa9.06□□□□□ -0.96
LIG3-207ENST00000586119 EPPK1P58107 5090 aaKnown RBP9.06□□□□□ -0.96
LIG3-207ENST00000586119 G3V318 75 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 MOSP00540 346 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 MT-ND4P03905 459 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 MAS1P04201 325 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 ELANEP08246 267 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 SLC2A2P11168 524 aaPredicted RBP9.05□□□□□ -0.96
LIG3-207ENST00000586119 GZMHP20718 246 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 SERPINA2P20848 420 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 CNTFRP26992 372 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 CD1BP29016 333 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 PAX5Q02548 391 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 CT45A1Q5HYN5 189 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 ATAD3CQ5T2N8 411 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 FAM27D1Q5T7N8 215 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 OVCH2Q7RTZ1 564 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 GPR141Q7Z602 305 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 TPRA1Q86W33 373 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 LYPD6Q86Y78 171 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 FAM71E2Q8N5Q1 922 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 RNF152Q8N8N0 203 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 OR10V1Q8NGI7 309 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 CT45A3Q8NHU0 189 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 RASL11BQ9BPW5 248 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 CHCHD6Q9BRQ6 235 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 OR51E2Q9H255 320 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 GHRLQ9UBU3 117 aa9.05□□□□□ -0.96
LIG3-207ENST00000586119 STAB2Q8WWQ8 2551 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 TMEM30CPA0ZSE6 113 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 AIREO43918 545 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 TMEM127O75204 238 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 ZNF780AO75290 641 aaPredicted RBP9.04□□□□□ -0.96
LIG3-207ENST00000586119 LY86O95711 162 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 IGHG4P01861 327 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 PSMB8P28062 276 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 KCNJ3P48549 501 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 RBM11P57052 281 aaKnown RBP9.04□□□□□ -0.96
LIG3-207ENST00000586119 GNB1P62873 340 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 DCTN2Q13561 401 aaKnown RBP9.04□□□□□ -0.96
LIG3-207ENST00000586119 FHL3Q13643 280 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 GPR176Q14439 515 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 C1orf100Q5SVJ3 147 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 C22orf42Q6IC83 251 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 ANKRD13BQ86YJ7 626 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 ZNF439Q8NDP4 499 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 OR4K15Q8NH41 348 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 OR1L1Q8NH94 360 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 C4orf3Q8WVX3 66 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 S100A13Q99584 98 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 FUNDC2Q9BWH2 189 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 ALX4Q9H161 411 aaPredicted RBP9.04□□□□□ -0.96
LIG3-207ENST00000586119 METTL9Q9H1A3 318 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 IL36GQ9NZH8 169 aa9.04□□□□□ -0.96
LIG3-207ENST00000586119 ZMAT5Q9UDW3 170 aaKnown RBP9.04□□□□□ -0.96
LIG3-207ENST00000586119 ZNF256Q9Y2P7 627 aaPredicted RBP9.04□□□□□ -0.96
LIG3-207ENST00000586119 LOC100506127A0A0U1RQW1 187 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 C12orf77C9JDV5 145 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 C3orf84H3BNL1 204 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 UBBP0CG47 229 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 VDAC1P21796 283 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
LIG3-207ENST00000586119 SOX6P35712 828 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 CASC10Q5T4H9 136 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 SLC25A48Q6ZT89 311 aaKnown RBP9.03□□□□□ -0.96
LIG3-207ENST00000586119 PRR18Q8N4B5 295 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 JAGN1Q8N5M9 183 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 ZNF491Q8N8L2 437 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 OR52M1Q8NGK5 317 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 OR6M1Q8NGM8 313 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 OR1N2Q8NGR9 330 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 DCUN1D4Q92564 292 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 BCL7BQ9BQE9 202 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 IFT22Q9H7X7 185 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 V9GY05 133 aa9.03□□□□□ -0.96
LIG3-207ENST00000586119 I3L521 148 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 AIPO00170 330 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 ORC5O43913 435 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 GABARAPO95166 117 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 CSTBP04080 98 aaKnown RBP9.02□□□□□ -0.97
LIG3-207ENST00000586119 IGF1P05019 195 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 SNRPBP14678 240 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms