RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 ZNF782Q6ZMW2 699 aaPredicted RBP7.58□□□□□ -1.2
UBBP4-201ENST00000583708 OVCH2Q7RTZ1 564 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 LDLRAD3Q86YD5 345 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 SNX29P2Q8IUI4 249 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 ARRDC1Q8N5I2 433 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 TMEM229BQ8NBD8 167 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF439Q8NDP4 499 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 OR10X1Q8NGY0 326 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 OR5R1Q8NH85 324 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 IL1F10Q8WWZ1 152 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 S1PR3Q99500 378 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 GINS4Q9BRT9 223 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 DPAGT1Q9H3H5 408 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 POMT1Q9Y6A1 747 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 MXRA5Q9NR99 2828 aa7.58□□□□□ -1.2
UBBP4-201ENST00000583708 TRAV39A0A0B4J263 110 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 MEIOCA2RUB1 952 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF736B4DX44 427 aaPredicted RBP7.57□□□□□ -1.2
UBBP4-201ENST00000583708 LY6LH3BQJ8 138 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 CLDN34H7C241 214 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 LANCL1O43813 399 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 TUSC2O75896 110 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 MMP23AO75900 390 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 OR5H8P0DN80 308 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 SAA4P35542 130 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 FAUP35544 74 aaKnown RBP7.57□□□□□ -1.2
UBBP4-201ENST00000583708 ECI1P42126 302 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 RPL15P61313 204 aaKnown RBP7.57□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF816Q0VGE8 651 aaPredicted RBP7.57□□□□□ -1.2
UBBP4-201ENST00000583708 DYRK1AQ13627 763 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 VAX1Q5SQQ9 334 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 LPCAT3Q6P1A2 487 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 THNSL2Q86YJ6 484 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 IZUMO1Q8IYV9 350 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 H1FOOQ8IZA3 346 aaPredicted RBP7.57□□□□□ -1.2
UBBP4-201ENST00000583708 PRR18Q8N4B5 295 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 ZBTB34Q8NCN2 500 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 OR4P4Q8NGL7 312 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 OR5H2Q8NGV7 314 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 OR6F1Q8NGZ6 308 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 OR52I2Q8NH67 350 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 SSMEM1Q8WWF3 244 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 ABHD14AQ9BUJ0 271 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF69Q9UC07 566 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF230Q9UIE0 474 aaPredicted RBP7.57□□□□□ -1.2
UBBP4-201ENST00000583708 ZNF221Q9UK13 617 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 ELF5Q9UKW6 265 aaPredicted RBP7.57□□□□□ -1.2
UBBP4-201ENST00000583708 OR2W1Q9Y3N9 320 aa7.57□□□□□ -1.2
UBBP4-201ENST00000583708 BET1O15155 118 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 CD74P04233 296 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 IFNA6P05013 189 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 COX7A1P24310 79 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 CD40LGP29965 261 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 GDNFP39905 211 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 LUMP51884 338 aaPredicted RBP7.56□□□□□ -1.2
UBBP4-201ENST00000583708 HERPUD1Q15011 391 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 PYDC2Q56P42 97 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 IGSF11Q5DX21 431 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 CT45A1Q5HYN5 189 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 Q6YL49 198 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 Q6ZPA2 131 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 LIAT1Q6ZQX7 453 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 LYSMD2Q8IV50 215 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 Q8N402 240 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 PIP4P2Q8N4L2 257 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 OR52L2PQ8NGH6 319 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 CT45A3Q8NHU0 189 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 ZFAND2BQ8WV99 257 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 GCDHQ92947 438 aaPredicted RBP7.56□□□□□ -1.2
UBBP4-201ENST00000583708 SNAPC3Q92966 411 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 ZDHHC16Q969W1 377 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 ST6GALNAC6Q969X2 333 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 RPEQ96AT9 228 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 ADTRPQ96IZ2 230 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 AKR1E2Q96JD6 320 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 AGMATQ9BSE5 352 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 THAP7Q9BT49 309 aaPredicted RBP7.56□□□□□ -1.2
UBBP4-201ENST00000583708 CCDC32Q9BV29 185 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 C11orf54Q9H0W9 315 aaPredicted RBP7.56□□□□□ -1.2
UBBP4-201ENST00000583708 RDH8Q9NYR8 311 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 PITPNC1Q9UKF7 332 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 V9GYH0 126 aa7.56□□□□□ -1.2
UBBP4-201ENST00000583708 ANK3Q12955 4377 aaKnown RBP7.55□□□□□ -1.2
UBBP4-201ENST00000583708 TEP1Q99973 2627 aaKnown RBP7.55□□□□□ -1.2
UBBP4-201ENST00000583708 IGKV1-6A0A0C4DH72 117 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 ANKRD20A5PA0PJZ0 165 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 BTBD17A6NE02 478 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 AKAIN1P0CW23 69 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 S100GP29377 79 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 MC5RP33032 325 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 PPP1CCP36873 323 aaKnown RBP7.55□□□□□ -1.2
UBBP4-201ENST00000583708 PPP5CP53041 499 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 UCP3P55916 312 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 KLRD1Q13241 179 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 HABP2Q14520 560 aaPredicted RBP7.55□□□□□ -1.2
UBBP4-201ENST00000583708 LTC4SQ16873 150 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 RNASE10Q5GAN6 216 aaKnown RBP7.55□□□□□ -1.2
UBBP4-201ENST00000583708 TPTE2P1Q5T6R2 138 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 C16orf82Q7Z2V1 217 aa7.55□□□□□ -1.2
UBBP4-201ENST00000583708 GVQW1Q8N7I0 195 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms