RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 MRPL51Q4U2R6 128 aaKnown RBP2.18□□□□□ -2.06
SMARCE1-219ENST00000583294 OR5AK3PQ8NH89 298 aa2.18□□□□□ -2.06
SMARCE1-219ENST00000583294 LINC00527Q9UJ94 153 aa2.18□□□□□ -2.06
SMARCE1-219ENST00000583294 LRPPRCP42704 1394 aaKnown RBP2.18□□□□□ -2.06
SMARCE1-219ENST00000583294 TRPC5OSA6NMA1 111 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 IQCF5A8MTL0 148 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 SYNGR1O43759 233 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 NPPAP01160 153 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 RWDD2BP57060 319 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 CCDC121Q6ZUS5 278 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 ZNF767PQ75MW2 155 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 OR10A6Q8NH74 314 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 BBS2Q9BXC9 721 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 C1orf109Q9NX04 203 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 MRPS16Q9Y3D3 137 aaKnown RBP2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 NUP153P49790 1475 aaKnown RBP2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 DSCAML1Q8TD84 2053 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 CLUHO75153 1309 aa2.17□□□□□ -2.06
SMARCE1-219ENST00000583294 ADAMTS7Q9UKP4 1686 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 ERICH4A6NGS2 130 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 FNDC10F2Z333 226 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 ARL6IP5O75915 188 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 GRPRP30550 384 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 GABRA4P48169 554 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 ZNF140P52738 457 aaPredicted RBP2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 SLAMF1Q13291 335 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 HES1Q14469 280 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 BLIDQ8IZY5 108 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 OR11H1Q8NG94 326 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 RNASE11Q8TAA1 199 aaKnown RBP2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 TNFAIP8L1Q8WVP5 186 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 MGLLQ99685 303 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 TXNDC17Q9BRA2 123 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 UPK3BQ9BT76 320 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 TMEM208Q9BTX3 173 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 C1QTNF6Q9BXI9 259 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 SMDT1Q9H4I9 107 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 C16orf95Q9H693 158 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 FAM206AQ9NX38 181 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 GLS2Q9UI32 602 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 ALG5Q9Y673 324 aa2.16□□□□□ -2.06
SMARCE1-219ENST00000583294 VWDEQ8N2E2 1590 aa2.15□□□□□ -2.06
SMARCE1-219ENST00000583294 COL5A3P25940 1745 aaPredicted RBP2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 ARHGAP32A7KAX9 2087 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 LINC00862A6NCI5 91 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 C19orf71A6NCJ1 209 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 KNCNA6PVL3 124 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 ADAP1O75689 374 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 LY6HO94772 140 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 OR13C7P0DN81 318 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 IGHV3-30-3P0DP02 117 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 AGTR1P30556 359 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 TMED1Q13445 227 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 EXOC3L4Q17RC7 722 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 RASL11AQ6T310 242 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 LRRC45Q96CN5 670 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 SMIM12Q96EX1 92 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 ABHD14BQ96IU4 210 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 TRNT1Q96Q11 434 aaKnown RBP2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 ZNF251Q9BRH9 671 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 TTTY12Q9BZ98 90 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 NDEL1Q9GZM8 345 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 SNX10Q9Y5X0 201 aa2.15□□□□□ -2.07
SMARCE1-219ENST00000583294 COL11A1P12107 1806 aaPredicted RBP2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 ADAMTSL1Q8N6G6 1762 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 F8VZ95 297 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 SCN2BO60939 215 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 ATP6V1G2O95670 118 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 ESDP10768 282 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 SLC25A16P16260 332 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 F8A1P23610 371 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 CDK2P24941 298 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 SS18Q15532 418 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 SPATA31B1PQ5VZV4 182 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 CFAP53Q96M91 514 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 MED28Q9H204 178 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 NRBP2Q9NSY0 501 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 PLXNA3P51805 1871 aa2.14□□□□□ -2.07
SMARCE1-219ENST00000583294 SLIT2O94813 1529 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 IGHV3-73A0A0B4J1V6 119 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 A0A1W2PQL4 384 aaPredicted RBP2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 STK16O75716 305 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 CD200P41217 278 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 OR1E2P47887 323 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 LINC00313P59037 77 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 PCOTHQ58A44 107 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 MESTQ5EB52 335 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 SCGB1D4Q6XE38 83 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 CCDC112Q8NEF3 446 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 C16orf78Q8WTQ4 265 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 ACY3Q96HD9 319 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 DNAJC30Q96LL9 226 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 GPR22Q99680 433 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 CDCA4Q9BXL8 241 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 METTL9Q9H1A3 318 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 TXNL4BQ9NX01 149 aaKnown RBP2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 PSORS1C2Q9UIG4 136 aa2.13□□□□□ -2.07
SMARCE1-219ENST00000583294 ADGRB3O60242 1522 aa2.12□□□□□ -2.07
SMARCE1-219ENST00000583294 DAPL1A0PJW8 107 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms