RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 C15orf65H3BRN8 121 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 CTDSP2O14595 271 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 IGHV3-7P01780 117 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 PF4V1P10720 104 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 GTF2F2P13984 249 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 MGMTP16455 207 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 CD33P20138 364 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 ZNF816Q0VGE8 651 aaPredicted RBP16.6■□□□□ 0.25
CCDC42-203ENST00000581598 DIAPH2-AS1Q14236 149 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 LTC4SQ16873 150 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 Q3ZCU0 254 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 LINC00311Q8N616 119 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 C8orf31Q8N9H6 132 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 Q96M66 194 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 TM2D1Q9BX74 207 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 TMEM59Q9BXS4 323 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 ABCG5Q9H222 651 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 MIXL1Q9H2W2 232 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 BANF2Q9H503 90 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 SPACA1Q9HBV2 294 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 RHBDL2Q9NX52 303 aa16.6■□□□□ 0.25
CCDC42-203ENST00000581598 TRAV39A0A0B4J263 110 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 ORC5O43913 435 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 CRTAPO75718 401 aaPredicted RBP16.59■□□□□ 0.25
CCDC42-203ENST00000581598 MPIG6BO95866 241 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 PRB2P02812 416 aaPredicted RBP16.59■□□□□ 0.25
CCDC42-203ENST00000581598 GNG10P50151 68 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 RPS27AP62979 156 aaKnown RBP16.59■□□□□ 0.25
CCDC42-203ENST00000581598 EBI3Q14213 229 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 C9orf152Q5JTZ5 239 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 UBE2NLQ5JXB2 153 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 ZNF497Q6ZNH5 498 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 C5orf56Q8N8D9 126 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 SAMD12Q8N8I0 201 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 OR10X1Q8NGY0 326 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 FAM46BQ96A09 425 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 C6orf62Q9GZU0 229 aaPredicted RBP16.59■□□□□ 0.25
CCDC42-203ENST00000581598 LPAR5Q9H1C0 372 aa16.59■□□□□ 0.25
CCDC42-203ENST00000581598 RCC2Q9P258 522 aaKnown RBP16.59■□□□□ 0.25
CCDC42-203ENST00000581598 HPGDSO60760 199 aa16.58■□□□□ 0.24
CCDC42-203ENST00000581598 APOA1P02647 267 aa16.58■□□□□ 0.24
CCDC42-203ENST00000581598 TMEM11P17152 192 aa16.58■□□□□ 0.24
CCDC42-203ENST00000581598 ATAD3CQ5T2N8 411 aa16.58■□□□□ 0.24
CCDC42-203ENST00000581598 C10orf99Q6UWK7 81 aa16.58■□□□□ 0.24
CCDC42-203ENST00000581598 FAM89BQ8N5H3 189 aa16.58■□□□□ 0.24
CCDC42-203ENST00000581598 OR6Q1Q8NGQ2 317 aa16.58■□□□□ 0.24
CCDC42-203ENST00000581598 ARL11Q969Q4 196 aa16.58■□□□□ 0.24
CCDC42-203ENST00000581598 PEX16Q9Y5Y5 336 aa16.58■□□□□ 0.24
CCDC42-203ENST00000581598 PSMB11A5LHX3 300 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 FAM90A10PA6NDY2 464 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 FAM90A7PA6NKC0 464 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 FAM90A23PA8MXZ1 464 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 HSD17B6O14756 317 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 PF4P02776 101 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 MT-ND4P03905 459 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 GAPDHP04406 335 aaKnown RBP16.57■□□□□ 0.24
CCDC42-203ENST00000581598 LOXL3P58215 753 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 HES1Q14469 280 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 TMEM30BQ3MIR4 351 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 LINC00299Q6ZSB3 139 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 LAX1Q8IWV1 398 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 CHPT1Q8WUD6 406 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 URM1Q9BTM9 101 aaKnown RBP16.57■□□□□ 0.24
CCDC42-203ENST00000581598 SELENOIQ9C0D9 397 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 AURKAIP1Q9NWT8 199 aaPredicted RBP16.57■□□□□ 0.24
CCDC42-203ENST00000581598 GFOD1Q9NXC2 390 aa16.57■□□□□ 0.24
CCDC42-203ENST00000581598 A0A0A6YYD4 124 aa16.56■□□□□ 0.24
CCDC42-203ENST00000581598 IGHV1-3A0A0C4DH29 117 aa16.56■□□□□ 0.24
CCDC42-203ENST00000581598 IGKV1D-33P01593 117 aa16.56■□□□□ 0.24
CCDC42-203ENST00000581598 IGKV1-33P01594 117 aa16.56■□□□□ 0.24
CCDC42-203ENST00000581598 EIF4EP06730 217 aaKnown RBP16.56■□□□□ 0.24
CCDC42-203ENST00000581598 ELK1P19419 428 aa16.56■□□□□ 0.24
CCDC42-203ENST00000581598 IZUMO1Q8IYV9 350 aa16.56■□□□□ 0.24
CCDC42-203ENST00000581598 GAPTQ8N292 157 aa16.56■□□□□ 0.24
CCDC42-203ENST00000581598 ST6GALNAC6Q969X2 333 aa16.56■□□□□ 0.24
CCDC42-203ENST00000581598 RCC1LQ96I51 464 aaKnown RBP16.56■□□□□ 0.24
CCDC42-203ENST00000581598 RAB9BQ9NP90 201 aa16.56■□□□□ 0.24
CCDC42-203ENST00000581598 ADAM30Q9UKF2 790 aa16.56■□□□□ 0.24
CCDC42-203ENST00000581598 A0A1W2PPE3 182 aa16.55■□□□□ 0.24
CCDC42-203ENST00000581598 FOXI3A8MTJ6 420 aaPredicted RBP16.55■□□□□ 0.24
CCDC42-203ENST00000581598 SDCBPO00560 298 aaPredicted RBP16.55■□□□□ 0.24
CCDC42-203ENST00000581598 RGS5O15539 181 aa16.55■□□□□ 0.24
CCDC42-203ENST00000581598 DUS4LO95620 317 aaKnown RBP16.55■□□□□ 0.24
CCDC42-203ENST00000581598 IGHG2P01859 326 aa16.55■□□□□ 0.24
CCDC42-203ENST00000581598 IGLL1P15814 213 aa16.55■□□□□ 0.24
CCDC42-203ENST00000581598 MRAPQ8TCY5 172 aa16.55■□□□□ 0.24
CCDC42-203ENST00000581598 NEK7Q8TDX7 302 aa16.55■□□□□ 0.24
CCDC42-203ENST00000581598 NICN1Q9BSH3 213 aa16.55■□□□□ 0.24
CCDC42-203ENST00000581598 A0A0A6YYH2 397 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 METTL21EPA6NDL7 271 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 A6NJ64 397 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 MCRIP1C9JLW8 97 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 RAB27BO00194 218 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 CA11O75493 328 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 SCGNO76038 276 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 GLAP06280 429 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 SLC6A1P30531 599 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 TRAT1Q6PIZ9 186 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 COMMD1Q8N668 190 aa16.54■□□□□ 0.24
CCDC42-203ENST00000581598 Q8N6K4 173 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms