RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 RYR2Q92736 4967 aa8.23□□□□□ -1.09
RFFL-209ENST00000581265 IGHV7-81A0A0B4J1V7 117 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 TRAV41A0A0B4J266 112 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 A0A1W2PPK0 400 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 UBE2QL1A1L167 161 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 ATP6V0E1O15342 81 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 MYF6P23409 242 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 GNB1P62873 340 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 C5orf64Q2M2E5 130 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 FAM27D1Q5T7N8 215 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 AWAT2Q6E213 333 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 ZNF833PQ6ZTB9 187 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 OR52L2PQ8NGH6 319 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 TMEM80Q96HE8 168 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 Q96M66 194 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 OR14A2Q96R54 314 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 ZNF251Q9BRH9 671 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 ABHD14AQ9BUJ0 271 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 BANF2Q9H503 90 aa8.22□□□□□ -1.09
RFFL-209ENST00000581265 SMPD3Q9NY59 655 aaPredicted RBP8.22□□□□□ -1.09
RFFL-209ENST00000581265 OVOL1O14753 267 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 NBR2O15453 112 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 PDCD6O75340 191 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 CRTAPO75718 401 aaPredicted RBP8.21□□□□□ -1.1
RFFL-209ENST00000581265 RGS11O94810 467 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 NDUFA3O95167 84 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 MAS1P04201 325 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 CNTFRP26992 372 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 BLVRBP30043 206 aaPredicted RBP8.21□□□□□ -1.1
RFFL-209ENST00000581265 PPP1CCP36873 323 aaKnown RBP8.21□□□□□ -1.1
RFFL-209ENST00000581265 CAPGP40121 348 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 MED21Q13503 144 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 GNMTQ14749 295 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 C19orf54Q5BKX5 351 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 C6orf141Q5SZD1 244 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 C5orf24Q7Z6I8 188 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 SBSPONQ8IVN8 264 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 ZFP41Q8N8Y5 198 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 MRPL30Q8TCC3 161 aaKnown RBP8.21□□□□□ -1.1
RFFL-209ENST00000581265 DCUN1D4Q92564 292 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 GALMQ96C23 342 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 OR5B12Q96R08 314 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 UQCC2Q9BRT2 126 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 MRPL20Q9BYC9 149 aaKnown RBP8.21□□□□□ -1.1
RFFL-209ENST00000581265 PARP11Q9NR21 331 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 GHRLQ9UBU3 117 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 ERGIC3Q9Y282 383 aa8.21□□□□□ -1.1
RFFL-209ENST00000581265 DYNC2H1Q8NCM8 4307 aaKnown RBP8.2□□□□□ -1.1
RFFL-209ENST00000581265 SOX15O60248 233 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 LY86O95711 162 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 CD1AP06126 327 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 OR3A3P47888 321 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 CRIP2P52943 208 aaPredicted RBP8.2□□□□□ -1.1
RFFL-209ENST00000581265 TAS2R43P59537 309 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 ST3GAL4Q11206 333 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 ZNF660Q6AZW8 331 aaPredicted RBP8.2□□□□□ -1.1
RFFL-209ENST00000581265 ZFAND6Q6FIF0 208 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 TCTEX1D1Q8N7M0 179 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 NKAIN3Q8N8D7 197 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 OR2AK2Q8NG84 335 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 GGHQ92820 318 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 DLX4Q92988 240 aaPredicted RBP8.2□□□□□ -1.1
RFFL-209ENST00000581265 CYYR1Q96J86 154 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 DERL3Q96Q80 235 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 TOLLIPQ9H0E2 274 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 CST11Q9H112 138 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 TPSG1Q9NRR2 321 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 KIAA1456Q9P272 454 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 NUBP2Q9Y5Y2 271 aa8.2□□□□□ -1.1
RFFL-209ENST00000581265 SAA2-SAA4A0A096LPE2 208 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 BAG2O95816 211 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 SAA2P0DJI9 122 aaPredicted RBP8.19□□□□□ -1.1
RFFL-209ENST00000581265 CELP19835 753 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 CX3CL1P78423 397 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 HMGN3Q15651 99 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 LRRC36Q1X8D7 754 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 TTC23Q5W5X9 447 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 FAM71F2Q6NXP2 309 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 ACSM6Q6P461 480 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 CD200R1LQ6Q8B3 271 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 THRSPQ92748 146 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 FAM46BQ96A09 425 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 RCHY1Q96PM5 261 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 IFI27L2Q9H2X8 130 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 GHITMQ9H3K2 345 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 ISYNA1Q9NPH2 558 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 PIPOXQ9P0Z9 390 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 FOXA2Q9Y261 457 aaPredicted RBP8.19□□□□□ -1.1
RFFL-209ENST00000581265 FBXO7Q9Y3I1 522 aa8.19□□□□□ -1.1
RFFL-209ENST00000581265 EFCAB10A6NFE3 127 aa8.18□□□□□ -1.1
RFFL-209ENST00000581265 LINC01619G3V211 115 aa8.18□□□□□ -1.1
RFFL-209ENST00000581265 FCN1O00602 326 aa8.18□□□□□ -1.1
RFFL-209ENST00000581265 RRHO14718 337 aa8.18□□□□□ -1.1
RFFL-209ENST00000581265 RAB29O14966 203 aa8.18□□□□□ -1.1
RFFL-209ENST00000581265 SAP30O75446 220 aa8.18□□□□□ -1.1
RFFL-209ENST00000581265 NAPSAO96009 420 aa8.18□□□□□ -1.1
RFFL-209ENST00000581265 UBBP0CG47 229 aa8.18□□□□□ -1.1
RFFL-209ENST00000581265 CT45A6P0DMU7 189 aa8.18□□□□□ -1.1
RFFL-209ENST00000581265 CT45A5P0DMU8 189 aa8.18□□□□□ -1.1
RFFL-209ENST00000581265 CT45A7P0DMV0 189 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms