RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SCTP09683 121 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SNRPEP62304 92 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 CCL8P80075 99 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 PJVKQ0ZLH3 352 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ZNF600Q6ZNG1 722 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FAM58AQ8N1B3 248 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 NUP37Q8NFH4 326 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 NRIP2Q9BQI9 281 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 PLA2G2EQ9NZK7 142 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 TRBV6-7A0A0A0MS04 114 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 COLCA2A8K830 154 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FABP1P07148 127 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 MUC1P15941 1255 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 TUBG1P23258 451 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 PMELP40967 661 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 WDR82Q6UXN9 313 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 RBMS3Q6XE24 437 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 IL34Q6ZMJ4 242 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SUMF2Q8NBJ7 301 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ITLN1Q8WWA0 313 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 MOB3AQ96BX8 217 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 NGBQ9NPG2 151 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 TUBG2Q9NRH3 451 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 RCC2Q9P258 522 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 OR14J1Q9UGF5 321 aa10.66□□□□□ -0.7
CDK5RAP3-217ENST00000580287 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 NXPH2O95156 264 aa10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 IGHV1-46P01743 117 aa10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 TK1P04183 234 aa10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SMCO1Q147U7 214 aa10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 PEA15Q15121 130 aa10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 MPV17LQ2QL34 196 aa10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 LYZL2Q7Z4W2 148 aa10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 MOGAT3Q86VF5 341 aa10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 DECR2Q9NUI1 292 aa10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FAM208BQ5VWN6 2430 aa10.65□□□□□ -0.7
CDK5RAP3-217ENST00000580287 FAM90A10PA6NDY2 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A18PA6NE21 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A16PA6NEW6 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A20PA6NIJ5 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A8PA6NJQ4 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A7PA6NKC0 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A22PA8MWA6 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A12PA8MX19 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A5PA8MXJ8 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 DEFB108AA8MXU0 73 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A23PA8MXZ1 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CLDN14O95500 239 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CD3EP07766 207 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A15PP0C7V4 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A13PP0C7W8 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A14PP0C7W9 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM90A24PP0C7X0 464 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SMIM6P0DI80 62 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SELENOVP59797 346 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RPS23P62266 143 aaKnown RBP10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ZNF565Q8N9K5 539 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 PPP1R35Q8TAP8 253 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ERGIC1Q969X5 290 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 PKIBQ9C010 78 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SLC5A7Q9GZV3 580 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 Q9N2K0 584 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 GSN-AS1Q9NRJ2 163 aa10.65□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CHD3Q12873 2000 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 PGA5P0DJD9 388 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FOLR2P14207 255 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 EGR1P18146 543 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LPAR6P43657 344 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RAB5BP61020 215 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ERVK11-1P61568 191 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 IL15RAQ13261 267 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 C1orf174Q8IYL3 243 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 PRR18Q8N4B5 295 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 MEGF10Q96KG7 1140 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RHOFQ9HBH0 211 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CISD1Q9NZ45 108 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LPAR3Q9UBY5 353 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RFNGQ9Y644 331 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 IGHV3OR15-7A0A075B7D8 119 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TRAV39A0A0B4J263 110 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TRAV20A0A0B4J274 112 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 A0A1B0GV50 99 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SIRPB1O00241 398 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 HKR1P10072 659 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TMEM187Q14656 261 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 AKIRIN2Q53H80 203 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CCDC71LQ8N9Z2 235 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 IL1F10Q8WWZ1 152 aa10.64□□□□□ -0.71
CDK5RAP3-217ENST00000580287 DOPEY1Q5JWR5 2465 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TRAV24A0A0B4J272 114 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 DEGS1O15121 323 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 PTBP3O95758 552 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 NAPSAO96009 420 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SFTA3P0C7M3 94 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FHITP49789 147 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LRRC29Q8WV35 223 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ZNF251Q9BRH9 671 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SPACA1Q9HBV2 294 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 METRNQ9UJH8 293 aa10.63□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CENPEQ02224 2701 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms