RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ECM29Q5VYK3 1845 aa2.3□□□□□ -2.04
KPNB1-208ENST00000580019 CEP295Q9C0D2 2601 aa2.3□□□□□ -2.04
KPNB1-208ENST00000580019 ITPR3Q14573 2671 aa2.3□□□□□ -2.04
KPNB1-208ENST00000580019 ITPR1Q14643 2758 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 GON4LQ3T8J9 2241 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 MED23Q9ULK4 1368 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 CLUHO75153 1309 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 TRAV19A0A0A6YYK7 116 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 TEX50A0A1B0GTY4 177 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 A0A1B0GXF2 115 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 PLIN3O60664 434 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 SPAG7O75391 227 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 TNFSF13O75888 250 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 HAND1O96004 215 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 HLA-DPB1P04440 258 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 CD79AP11912 226 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 CBR1P16152 277 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 CD36P16671 472 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 ZNF30P17039 623 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 NELFEP18615 380 aaKnown RBP2.29□□□□□ -2.04
KPNB1-208ENST00000580019 PSMB1P20618 241 aaKnown RBP2.29□□□□□ -2.04
KPNB1-208ENST00000580019 PRTN3P24158 256 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 MIPP30301 263 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 SLC6A1P30531 599 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 ACOT2P49753 483 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 H2BFSP57053 126 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 RAB5BP61020 215 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 DYNLL1P63167 89 aaKnown RBP2.29□□□□□ -2.04
KPNB1-208ENST00000580019 MS4A2Q01362 244 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 ADIGQ0VDE8 80 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 SKP2Q13309 424 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 C1DQ13901 141 aaKnown RBP2.29□□□□□ -2.04
KPNB1-208ENST00000580019 RSU1Q15404 277 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 BATFQ16520 125 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 RSPO1Q2MKA7 263 aaPredicted RBP2.29□□□□□ -2.04
KPNB1-208ENST00000580019 ACSBG2Q5FVE4 666 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 TCTEX1D4Q5JR98 221 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 TSPO2Q5TGU0 170 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 RSBN1Q5VWQ0 802 aaPredicted RBP2.29□□□□□ -2.04
KPNB1-208ENST00000580019 KDM4DQ6B0I6 523 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 FAAP20Q6NZ36 180 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 ZNF613Q6PF04 617 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 Q6ZSR6 202 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 NATD1Q8N6N6 113 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 FMC1Q96HJ9 113 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 LINC00479Q96M42 142 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 HSD17B10Q99714 261 aaKnown RBP2.29□□□□□ -2.04
KPNB1-208ENST00000580019 HOPXQ9BPY8 73 aaPredicted RBP2.29□□□□□ -2.04
KPNB1-208ENST00000580019 CMSS1Q9BQ75 279 aaKnown RBP2.29□□□□□ -2.04
KPNB1-208ENST00000580019 GFRA4Q9GZZ7 299 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 NMNAT1Q9HAN9 279 aaPredicted RBP2.29□□□□□ -2.04
KPNB1-208ENST00000580019 PARP11Q9NR21 331 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 BATF3Q9NR55 127 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 UBQLN4Q9NRR5 601 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 PARVAQ9NVD7 372 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 GLS2Q9UI32 602 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 TBX21Q9UL17 535 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 PSG8Q9UQ74 426 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 TIMM22Q9Y584 194 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 INSIG2Q9Y5U4 225 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 CELSR3Q9NYQ7 3312 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 ASXL3Q9C0F0 2248 aa2.29□□□□□ -2.04
KPNB1-208ENST00000580019 ARAP2Q8WZ64 1704 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 FREM2Q5SZK8 3169 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 TGIF2-C20orf24A0A0A6YYL0 155 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 IGHV3-74A0A0B4J1X5 117 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 IGKV1-8A0A0C4DH67 115 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 VPS37CA5D8V6 355 aaPredicted RBP2.28□□□□□ -2.04
KPNB1-208ENST00000580019 CD300LBA8K4G0 201 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 DISC1C4P0D8 188 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 KRTAP4-16G5E9R7 235 aaPredicted RBP2.28□□□□□ -2.04
KPNB1-208ENST00000580019 H3BP45 60 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 M0QYV0 167 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 CHP2O43745 196 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 CCDC22O60826 627 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 NOS1APO75052 506 aaPredicted RBP2.28□□□□□ -2.04
KPNB1-208ENST00000580019 DHRS3O75911 302 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 ARL6IP5O75915 188 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 GABARAPO95166 117 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 IL3P08700 152 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 OR4Q2P0C623 313 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 CYBAP13498 195 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 DDTP30046 118 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 PRSS3P35030 304 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 POLR2IP36954 125 aaKnown RBP2.28□□□□□ -2.04
KPNB1-208ENST00000580019 CDK9P50750 372 aaKnown RBP2.28□□□□□ -2.04
KPNB1-208ENST00000580019 PSME3P61289 254 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 RPL23P62829 140 aaKnown RBP2.28□□□□□ -2.04
KPNB1-208ENST00000580019 HIST1H3AP68431 136 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 BTN3A2P78410 334 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 CRADDP78560 199 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 H3F3AP84243 136 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 TFAMQ00059 246 aaKnown RBP2.28□□□□□ -2.04
KPNB1-208ENST00000580019 PNOCQ13519 176 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 IHHQ14623 411 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 EBPQ15125 230 aaKnown RBP2.28□□□□□ -2.04
KPNB1-208ENST00000580019 RBMY1FQ15415 496 aaKnown RBP2.28□□□□□ -2.04
KPNB1-208ENST00000580019 Q499Y3 187 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 PYCR3Q53H96 274 aa2.28□□□□□ -2.04
KPNB1-208ENST00000580019 HES5Q5TA89 166 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms