RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 A0A1W2PRD5 423 aa13.89□□□□□ -0.19
NUP88-210ENST00000574867 A0A1W2PRF3 423 aa13.89□□□□□ -0.19
NUP88-210ENST00000574867 A0A1W2PRM7 423 aa13.89□□□□□ -0.19
NUP88-210ENST00000574867 ITGB1BP1O14713 200 aa13.89□□□□□ -0.19
NUP88-210ENST00000574867 CEACAM6P40199 344 aa13.89□□□□□ -0.19
NUP88-210ENST00000574867 ACTBL2Q562R1 376 aa13.89□□□□□ -0.19
NUP88-210ENST00000574867 PYDC2Q56P42 97 aa13.89□□□□□ -0.19
NUP88-210ENST00000574867 FAM216AQ8WUB2 273 aa13.89□□□□□ -0.19
NUP88-210ENST00000574867 ABHD14AQ9BUJ0 271 aa13.89□□□□□ -0.19
NUP88-210ENST00000574867 KLK11Q9UBX7 282 aa13.89□□□□□ -0.19
NUP88-210ENST00000574867 IGHV3-7P01780 117 aa13.88□□□□□ -0.19
NUP88-210ENST00000574867 FCER2P06734 321 aa13.88□□□□□ -0.19
NUP88-210ENST00000574867 TBPP20226 339 aa13.88□□□□□ -0.19
NUP88-210ENST00000574867 HTR1DP28221 377 aa13.88□□□□□ -0.19
NUP88-210ENST00000574867 OR10X1Q8NGY0 326 aa13.88□□□□□ -0.19
NUP88-210ENST00000574867 RDH8Q9NYR8 311 aa13.88□□□□□ -0.19
NUP88-210ENST00000574867 TAS2R8Q9NYW2 309 aa13.88□□□□□ -0.19
NUP88-210ENST00000574867 RBMX2Q9Y388 322 aaKnown RBP13.88□□□□□ -0.19
NUP88-210ENST00000574867 FAM157CP0CG43 387 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 IL3RAP26951 378 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 CEACAM3P40198 252 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 OR3A3P47888 321 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 RAB7AP51149 207 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 CDK10Q15131 360 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 FAM53AQ6NSI3 398 aaPredicted RBP13.87□□□□□ -0.19
NUP88-210ENST00000574867 Q8N402 240 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 OR5H2Q8NGV7 314 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 S100ZQ8WXG8 99 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 FN1P02751 2386 aaKnown RBP13.87□□□□□ -0.19
NUP88-210ENST00000574867 BUB1B-PAK6H3BSN5 160 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 CT45A1Q5HYN5 189 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 H1FOOQ8IZA3 346 aaPredicted RBP13.87□□□□□ -0.19
NUP88-210ENST00000574867 GDPD1Q8N9F7 314 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 CT45A3Q8NHU0 189 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 SRRQ9GZT4 340 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 AKIP1Q9NQ31 210 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 DPM3Q9P2X0 92 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 FAM96BQ9Y3D0 163 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 SVEP1Q4LDE5 3571 aa13.87□□□□□ -0.19
NUP88-210ENST00000574867 TEP1Q99973 2627 aaKnown RBP13.86□□□□□ -0.19
NUP88-210ENST00000574867 A0A1W2PPE3 182 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 LEUTXA8MZ59 168 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 ZNF736B4DX44 427 aaPredicted RBP13.86□□□□□ -0.19
NUP88-210ENST00000574867 FBP1P09467 338 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 CSF1P09603 554 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 HLA-DMAP28067 261 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 TAS2R19P59542 299 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 LYSMD2Q8IV50 215 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 GHITMQ9H3K2 345 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 A0A0U1RQK1 487 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 SLC31A2O15432 143 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 OR5H8P0DN80 308 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 HRH1P35367 487 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 ZNF134P52741 427 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 OVCH2Q7RTZ1 564 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 LHFPL4Q7Z7J7 247 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 MFSD4AQ8N468 514 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 TMEM229BQ8NBD8 167 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 MALSU1Q96EH3 234 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 EHFQ9NZC4 300 aa13.86□□□□□ -0.19
NUP88-210ENST00000574867 ANK3Q12955 4377 aaKnown RBP13.85□□□□□ -0.19
NUP88-210ENST00000574867 ZNF137PP52743 207 aa13.85□□□□□ -0.19
NUP88-210ENST00000574867 TUSC1Q2TAM9 212 aa13.85□□□□□ -0.19
NUP88-210ENST00000574867 C22orf15Q8WYQ4 148 aa13.85□□□□□ -0.19
NUP88-210ENST00000574867 THAP7Q9BT49 309 aaPredicted RBP13.85□□□□□ -0.19
NUP88-210ENST00000574867 C11orf54Q9H0W9 315 aaPredicted RBP13.85□□□□□ -0.19
NUP88-210ENST00000574867 IFI27L2Q9H2X8 130 aa13.85□□□□□ -0.19
NUP88-210ENST00000574867 ZNRD1Q9P1U0 126 aa13.85□□□□□ -0.19
NUP88-210ENST00000574867 OOSP1A8MZH6 123 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 PMP2P02689 132 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 DYRK1AQ13627 763 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 VAX1Q5SQQ9 334 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 BCL6BQ8N143 479 aaPredicted RBP13.84□□□□□ -0.19
NUP88-210ENST00000574867 TRIM63Q969Q1 353 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 AJUBAQ96IF1 538 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 SLC6A7Q99884 636 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 PARP12Q9H0J9 701 aaKnown RBP13.84□□□□□ -0.19
NUP88-210ENST00000574867 OR2W1Q9Y3N9 320 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 LY6LH3BQJ8 138 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 ST8SIA5O15466 376 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 TUSC2O75896 110 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 RNASE10Q5GAN6 216 aaKnown RBP13.84□□□□□ -0.19
NUP88-210ENST00000574867 TPTE2P1Q5T6R2 138 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 LYG1Q8N1E2 194 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 TOMM40LQ969M1 308 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 RPEQ96AT9 228 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 AGMATQ9BSE5 352 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 PIPOXQ9P0Z9 390 aa13.84□□□□□ -0.19
NUP88-210ENST00000574867 CD74P04233 296 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 CD3DP04234 171 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 NFYAP23511 347 aaPredicted RBP13.83□□□□□ -0.2
NUP88-210ENST00000574867 FCGR2CP31995 323 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 RFX2P48378 723 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 ARHGDIBP52566 201 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 AP3S2P59780 193 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 DEFB112Q30KQ8 113 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 LDLRAD2Q5SZI1 272 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 CCDC144NLQ6NUI1 221 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 WDR12Q9GZL7 423 aaKnown RBP13.83□□□□□ -0.2
NUP88-210ENST00000574867 PRDM13Q9H4Q3 707 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms