RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 C6orf141Q5SZD1 244 aa17.04■□□□□ 0.32
SNF8-216ENST00000573795 SMPD3Q9NY59 655 aaPredicted RBP17.04■□□□□ 0.32
SNF8-216ENST00000573795 JPT1Q9UK76 154 aa17.04■□□□□ 0.32
SNF8-216ENST00000573795 FBXO7Q9Y3I1 522 aa17.04■□□□□ 0.32
SNF8-216ENST00000573795 SMAD5-AS1Q9Y6J3 95 aa17.04■□□□□ 0.32
SNF8-216ENST00000573795 CSMD3Q7Z407 3707 aa17.04■□□□□ 0.32
SNF8-216ENST00000573795 TENM2Q9NT68 2774 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 TRAV41A0A0B4J266 112 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 NBR2O15453 112 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 MAS1P04201 325 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 GLAP06280 429 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 MYL12AP19105 171 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 FUT3P21217 361 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 OR3A3P47888 321 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 RAB9AP51151 201 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 C5orf64Q2M2E5 130 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 TMEM65Q6PI78 240 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 ZNF833PQ6ZTB9 187 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 SBSPONQ8IVN8 264 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 MINDY2Q8NBR6 621 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 DCUN1D4Q92564 292 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 DERL3Q96Q80 235 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 ALX4Q9H161 411 aaPredicted RBP17.03■□□□□ 0.32
SNF8-216ENST00000573795 ISYNA1Q9NPH2 558 aa17.03■□□□□ 0.32
SNF8-216ENST00000573795 IRGMA1A4Y4 181 aa17.02■□□□□ 0.32
SNF8-216ENST00000573795 SOX15O60248 233 aa17.02■□□□□ 0.32
SNF8-216ENST00000573795 CRTAPO75718 401 aaPredicted RBP17.02■□□□□ 0.32
SNF8-216ENST00000573795 NDUFA3O95167 84 aa17.02■□□□□ 0.32
SNF8-216ENST00000573795 LY86O95711 162 aa17.02■□□□□ 0.32
SNF8-216ENST00000573795 ZNF554Q86TJ5 538 aa17.02■□□□□ 0.32
SNF8-216ENST00000573795 CDH26Q8IXH8 852 aa17.02■□□□□ 0.32
SNF8-216ENST00000573795 ZNF555Q8NEP9 628 aa17.02■□□□□ 0.32
SNF8-216ENST00000573795 NPBQ8NG41 125 aa17.02■□□□□ 0.32
SNF8-216ENST00000573795 TMEM80Q96HE8 168 aa17.02■□□□□ 0.32
SNF8-216ENST00000573795 ZNF251Q9BRH9 671 aa17.02■□□□□ 0.32
SNF8-216ENST00000573795 SAA2-SAA4A0A096LPE2 208 aa17.01■□□□□ 0.31
SNF8-216ENST00000573795 YPEL1O60688 119 aa17.01■□□□□ 0.31
SNF8-216ENST00000573795 PDCD6O75340 191 aa17.01■□□□□ 0.31
SNF8-216ENST00000573795 SAA2P0DJI9 122 aaPredicted RBP17.01■□□□□ 0.31
SNF8-216ENST00000573795 HTD2P86397 168 aa17.01■□□□□ 0.31
SNF8-216ENST00000573795 LY6G6FQ5SQ64 297 aa17.01■□□□□ 0.31
SNF8-216ENST00000573795 YPEL2Q96QA6 119 aa17.01■□□□□ 0.31
SNF8-216ENST00000573795 IFI27L2Q9H2X8 130 aa17.01■□□□□ 0.31
SNF8-216ENST00000573795 TPSG1Q9NRR2 321 aa17.01■□□□□ 0.31
SNF8-216ENST00000573795 PNMA8CA0A1B0GUJ8 204 aa17■□□□□ 0.31
SNF8-216ENST00000573795 OVOL1O14753 267 aa17■□□□□ 0.31
SNF8-216ENST00000573795 CRIP2P52943 208 aaPredicted RBP17■□□□□ 0.31
SNF8-216ENST00000573795 ZNF429Q86V71 674 aa17■□□□□ 0.31
SNF8-216ENST00000573795 GGHQ92820 318 aa17■□□□□ 0.31
SNF8-216ENST00000573795 DLX4Q92988 240 aaPredicted RBP17■□□□□ 0.31
SNF8-216ENST00000573795 FAM46BQ96A09 425 aa17■□□□□ 0.31
SNF8-216ENST00000573795 KCNIP1Q9NZI2 227 aa17■□□□□ 0.31
SNF8-216ENST00000573795 CAPGP40121 348 aa16.99■□□□□ 0.31
SNF8-216ENST00000573795 SLURP1P55000 103 aa16.99■□□□□ 0.31
SNF8-216ENST00000573795 HMGN3Q15651 99 aa16.99■□□□□ 0.31
SNF8-216ENST00000573795 CASC10Q5T4H9 136 aa16.99■□□□□ 0.31
SNF8-216ENST00000573795 LIN54Q6MZP7 749 aa16.99■□□□□ 0.31
SNF8-216ENST00000573795 MUC7Q8TAX7 377 aa16.99■□□□□ 0.31
SNF8-216ENST00000573795 CASTOR1Q8WTX7 329 aa16.99■□□□□ 0.31
SNF8-216ENST00000573795 RCHY1Q96PM5 261 aa16.99■□□□□ 0.31
SNF8-216ENST00000573795 SULT4A1Q9BR01 284 aa16.99■□□□□ 0.31
SNF8-216ENST00000573795 BAG2O95816 211 aa16.98■□□□□ 0.31
SNF8-216ENST00000573795 SPNP16150 400 aa16.98■□□□□ 0.31
SNF8-216ENST00000573795 ECSCRQ19T08 205 aa16.98■□□□□ 0.31
SNF8-216ENST00000573795 FAM27D1Q5T7N8 215 aa16.98■□□□□ 0.31
SNF8-216ENST00000573795 OVCH2Q7RTZ1 564 aa16.98■□□□□ 0.31
SNF8-216ENST00000573795 C10orf67Q8IYJ2 551 aa16.98■□□□□ 0.31
SNF8-216ENST00000573795 TOLLIPQ9H0E2 274 aa16.98■□□□□ 0.31
SNF8-216ENST00000573795 SAP30O75446 220 aa16.97■□□□□ 0.31
SNF8-216ENST00000573795 EGR2P11161 476 aaPredicted RBP16.97■□□□□ 0.31
SNF8-216ENST00000573795 ST3GAL4Q11206 333 aa16.97■□□□□ 0.31
SNF8-216ENST00000573795 LRRC36Q1X8D7 754 aa16.97■□□□□ 0.31
SNF8-216ENST00000573795 LAIR2Q6ISS4 152 aa16.97■□□□□ 0.31
SNF8-216ENST00000573795 FAM131AQ6UXB0 335 aa16.97■□□□□ 0.31
SNF8-216ENST00000573795 NKAIN3Q8N8D7 197 aa16.97■□□□□ 0.31
SNF8-216ENST00000573795 UQCC2Q9BRT2 126 aa16.97■□□□□ 0.31
SNF8-216ENST00000573795 FBXL15Q9H469 300 aa16.97■□□□□ 0.31
SNF8-216ENST00000573795 CHCHD3Q9NX63 227 aaKnown RBP16.97■□□□□ 0.31
SNF8-216ENST00000573795 IGHV4OR15-8A0A075B7B6 117 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 A0A087WW49 117 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 A0A1W2PN81 502 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 LINC01619G3V211 115 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 ST8SIA5O15466 376 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 LGALS1P09382 135 aaKnown RBP16.96■□□□□ 0.31
SNF8-216ENST00000573795 FRMD6-AS1P0C7T7 363 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 SNRPBP14678 240 aaKnown RBP16.96■□□□□ 0.31
SNF8-216ENST00000573795 CHRNA7P36544 502 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 TAS2R43P59537 309 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 OR10K2Q6IF99 312 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 FAM71F2Q6NXP2 309 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 OR2AK2Q8NG84 335 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 GALMQ96C23 342 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 PARP12Q9H0J9 701 aaKnown RBP16.96■□□□□ 0.31
SNF8-216ENST00000573795 CST11Q9H112 138 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 KIAA1456Q9P272 454 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 BIRC6Q9NR09 4857 aa16.96■□□□□ 0.31
SNF8-216ENST00000573795 TRIM64CA6NLI5 447 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 FCN1O00602 326 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 RGS11O94810 467 aa16.95■□□□□ 0.3
SNF8-216ENST00000573795 CD1AP06126 327 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms