RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TIPARPQ7Z3E1 657 aaKnown RBP13.25□□□□□ -0.29
NUP88-207ENST00000573584 HLA-CQ95604 372 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 PINX1Q96BK5 328 aaKnown RBP13.25□□□□□ -0.29
NUP88-207ENST00000573584 FAM173AQ9BQD7 235 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 OR51I2Q9H344 312 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 PRDM13Q9H4Q3 707 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 TRAPPC2LQ9UL33 140 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 FRYQ5TBA9 3013 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 TRBV24-1A0A075B6N3 115 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 IFNA1P01562 189 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 OPN1MWP04001 364 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 PGA5P0DJD9 388 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 OPN1MW2P0DN77 364 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 OPN1MW3P0DN78 364 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 WNT5AP41221 380 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 Q6P435 159 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 C6orf15Q6UXA7 325 aaPredicted RBP13.25□□□□□ -0.29
NUP88-207ENST00000573584 BEND4Q6ZU67 534 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 PKIBQ9C010 78 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 LIN7CQ9NUP9 197 aaKnown RBP13.25□□□□□ -0.29
NUP88-207ENST00000573584 TNRC6BQ9UPQ9 1833 aaKnown RBP13.24□□□□□ -0.29
NUP88-207ENST00000573584 FAM166BA8MTA8 275 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 SIRPB1O00241 398 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 ZNF737O75373 536 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 APLNRP35414 380 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 HES7Q9BYE0 225 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 TMEM9BQ9NQ34 198 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 SLC39A9Q9NUM3 307 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 B4GALT7Q9UBV7 327 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 B4E171 279 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 NEURL1O76050 574 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 LY86O95711 162 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 TSPAN7P41732 249 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 CLN3Q13286 438 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 WDR25Q64LD2 544 aaPredicted RBP13.24□□□□□ -0.29
NUP88-207ENST00000573584 TAF15Q92804 592 aaKnown RBP eCLIP13.24□□□□□ -0.29
NUP88-207ENST00000573584 LHX4Q969G2 390 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 CTDSP1Q9GZU7 261 aa13.24□□□□□ -0.29
NUP88-207ENST00000573584 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 MAGEA5P43359 124 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 HNF4GQ14541 408 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 SPATA46Q5T0L3 261 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 S100PBPQ96BU1 408 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 SNX22Q96L94 193 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 R4GN57 208 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 A0A1W2PR80 420 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 PHOX2AO14813 284 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 NDUFS6O75380 124 aaKnown RBP13.23□□□□□ -0.29
NUP88-207ENST00000573584 MDKP21741 143 aaPredicted RBP13.23□□□□□ -0.29
NUP88-207ENST00000573584 GPX4P36969 197 aaPredicted RBP13.23□□□□□ -0.29
NUP88-207ENST00000573584 CEACAM6P40199 344 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 SLC38A11Q08AI6 406 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 OR8G2PQ6IF36 304 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 MOB1BQ7L9L4 216 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 FGFRL1Q8N441 504 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 SMIM7Q9BQ49 75 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 J3QT63 122 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 ADIRFQ15847 76 aa13.23□□□□□ -0.29
NUP88-207ENST00000573584 RPP25LQ8N5L8 163 aaKnown RBP13.23□□□□□ -0.29
NUP88-207ENST00000573584 OR2H2O95918 312 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 CD81P60033 236 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 GAMTQ14353 236 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 ZNF497Q6ZNH5 498 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 NUFIP2Q7Z417 695 aaKnown RBP13.22□□□□□ -0.29
NUP88-207ENST00000573584 MYPOPQ86VE0 399 aaPredicted RBP13.22□□□□□ -0.29
NUP88-207ENST00000573584 OR10A7Q8NGE5 316 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 PACRGQ96M98 296 aaPredicted RBP13.22□□□□□ -0.29
NUP88-207ENST00000573584 NAT8Q9UHE5 227 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 CER1O95813 267 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 CLDN1O95832 211 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 NCR3LG1Q68D85 454 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 DRAM1Q8N682 238 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 PARD6GQ9BYG4 376 aaPredicted RBP13.22□□□□□ -0.29
NUP88-207ENST00000573584 PITPNC1Q9UKF7 332 aa13.22□□□□□ -0.29
NUP88-207ENST00000573584 IGKV1D-33P01593 117 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 IGKV1-33P01594 117 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 CD55P08174 381 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 HOXA6P31267 233 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 ZXDAP98168 799 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 MEF2BQ02080 365 aaPredicted RBP13.21□□□□□ -0.29
NUP88-207ENST00000573584 TLE1Q04724 770 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 TMEM241Q24JQ0 296 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 ABHD17BQ5VST6 288 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 ZNF600Q6ZNG1 722 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 MCEMP1Q8IX19 187 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 STRADBQ9C0K7 418 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 PRSS50Q9UI38 385 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 LOXL2Q9Y4K0 774 aa13.21□□□□□ -0.29
NUP88-207ENST00000573584 HMGB3O15347 200 aaKnown RBP13.21□□□□□ -0.3
NUP88-207ENST00000573584 C3AR1Q16581 482 aa13.21□□□□□ -0.3
NUP88-207ENST00000573584 RHOVQ96L33 236 aa13.21□□□□□ -0.3
NUP88-207ENST00000573584 HIST1H2BLQ99880 126 aa13.21□□□□□ -0.3
NUP88-207ENST00000573584 TTTY12Q9BZ98 90 aa13.21□□□□□ -0.3
NUP88-207ENST00000573584 CDH20Q9HBT6 801 aa13.21□□□□□ -0.3
NUP88-207ENST00000573584 MT-CO3P00414 261 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 PLA2G5P39877 138 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.2□□□□□ -0.3
NUP88-207ENST00000573584 OR4X1Q8NH49 305 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 C12orf49Q9H741 205 aa13.2□□□□□ -0.3
NUP88-207ENST00000573584 DOCK10Q96BY6 2186 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms