RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 A0A1B0GWA3 101 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 EMDP50402 254 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 PIGPP57054 158 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 SUPT4H1P63272 117 aaKnown RBP9.33□□□□□ -0.92
CLK3-226ENST00000569406 MRPS21P82921 87 aaKnown RBP9.33□□□□□ -0.92
CLK3-226ENST00000569406 LCN12Q6JVE5 192 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 OR10V1Q8NGI7 309 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 MRM2Q9UI43 246 aaKnown RBP9.33□□□□□ -0.92
CLK3-226ENST00000569406 CD207Q9UJ71 328 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 SPTY2D1-AS1A0A0U1RR47 76 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 F2Z2F3 143 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 HBE1P02100 147 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 DBIP07108 87 aaKnown RBP9.33□□□□□ -0.92
CLK3-226ENST00000569406 CELA3AP09093 270 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 H2BFMP0C1H6 154 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 YPEL5P62699 121 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 RUNX1Q01196 453 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 PCK2Q16822 640 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 ABHD17AQ96GS6 310 aa9.33□□□□□ -0.92
CLK3-226ENST00000569406 DOCK11Q5JSL3 2073 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 ADAMTS20P59510 1910 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 PCNX3Q9H6A9 2034 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 ZNF253O75346 499 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 NDUFB2O95178 105 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 GPR75O95800 540 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 TSPAN13O95857 204 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 TACSTD2P09758 323 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 IL15RAQ13261 267 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 HOGA1Q86XE5 327 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 DEFB125Q8N687 156 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 OR4F17Q8NGA8 305 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 KTI12Q96EK9 354 aaPredicted RBP9.32□□□□□ -0.92
CLK3-226ENST00000569406 TSPAN32Q96QS1 320 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 OR4F4Q96R69 305 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 GPER1Q99527 375 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 HHLA2Q9UM44 414 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 POLR1DQ9Y2S0 133 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 ENTPD2Q9Y5L3 495 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 NSG1A0A0A6YYJ2 146 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 A0A0G2JMM0 328 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 A0A1W2PPB8 328 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 KIR3DP1A8MWS1 328 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 C2CD4DB7Z1M9 353 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 SCGB2A1O75556 95 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 NKX2-2O95096 273 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 HLA-HP01893 362 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 IFI6P09912 130 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 FAM87AP0C7U9 286 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 DNASE1L1P49184 302 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 CTXN1P60606 82 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 MEF2CQ06413 473 aaPredicted RBP9.32□□□□□ -0.92
CLK3-226ENST00000569406 TCTEX1D4Q5JR98 221 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 SPIN3Q5JUX0 258 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 STUMQ69YW2 141 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 SLC18B1Q6NT16 456 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 SULF2Q8IWU5 870 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 MTURNQ8N3F0 131 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 ZNRF4Q8WWF5 429 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
CLK3-226ENST00000569406 PERPQ96FX8 193 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 FAM231BA6NCW3 169 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 H3BMH7 237 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 SLC17A2O00624 439 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 RPL32P62910 135 aaKnown RBP9.32□□□□□ -0.92
CLK3-226ENST00000569406 ARG2P78540 354 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 PRTGQ2VWP7 1150 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 INO80CQ6PI98 192 aaPredicted RBP9.32□□□□□ -0.92
CLK3-226ENST00000569406 WDYHV1Q96HA8 205 aa9.32□□□□□ -0.92
CLK3-226ENST00000569406 PSMG3Q9BT73 122 aaPredicted RBP9.32□□□□□ -0.92
CLK3-226ENST00000569406 A0A0B4J2E0 115 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 A0A1B0GX12 115 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 BCL2P10415 239 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 NTF3P20783 257 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 Q8N976 141 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 OR13G1Q8NGZ3 307 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 VSTM2LQ96N03 204 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 VN1R1Q9GZP7 353 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 SERTAD4Q9NUC0 356 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 DNAJB12Q9NXW2 375 aaKnown RBP9.31□□□□□ -0.92
CLK3-226ENST00000569406 TP53TG3Q9ULZ0 132 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 GPR132Q9UNW8 380 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 PXMP4Q9Y6I8 212 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 COL5A1P20908 1838 aaPredicted RBP9.31□□□□□ -0.92
CLK3-226ENST00000569406 ZNF133P52736 654 aaPredicted RBP9.31□□□□□ -0.92
CLK3-226ENST00000569406 RRADP55042 308 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 IGLV3-21P80748 117 aaPredicted RBP9.31□□□□□ -0.92
CLK3-226ENST00000569406 CD300EQ496F6 205 aaPredicted RBP9.31□□□□□ -0.92
CLK3-226ENST00000569406 CPEB2Q7Z5Q1 589 aaKnown RBP9.31□□□□□ -0.92
CLK3-226ENST00000569406 MRPL24Q96A35 216 aaKnown RBP9.31□□□□□ -0.92
CLK3-226ENST00000569406 RNF183Q96D59 192 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 HRASLS2Q9NWW9 162 aa9.31□□□□□ -0.92
CLK3-226ENST00000569406 A0A0J9YY10 115 aa9.3□□□□□ -0.92
CLK3-226ENST00000569406 MEGF11A6BM72 1044 aa9.3□□□□□ -0.92
CLK3-226ENST00000569406 MT-ATP6P00846 226 aa9.3□□□□□ -0.92
CLK3-226ENST00000569406 GLI4P10075 376 aa9.3□□□□□ -0.92
CLK3-226ENST00000569406 OTX2P32243 289 aa9.3□□□□□ -0.92
CLK3-226ENST00000569406 RPL23P62829 140 aaKnown RBP9.3□□□□□ -0.92
CLK3-226ENST00000569406 BVES-AS1Q5T3Y7 98 aa9.3□□□□□ -0.92
CLK3-226ENST00000569406 ZIC4Q8N9L1 334 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms