RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 HLA-DMAP28067 261 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 HTR1DP28221 377 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 CD34P28906 385 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 GDNFP39905 211 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 LOXL3P58215 753 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 TSPAN5P62079 268 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 ACTBL2Q562R1 376 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 IGSF11Q5DX21 431 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 BEND2Q8NDZ0 799 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 SMIM4Q8WVI0 70 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 LEAP2Q969E1 77 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 THAP7Q9BT49 309 aaPredicted RBP13.06□□□□□ -0.32
USB1-215ENST00000569252 KLK11Q9UBX7 282 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 PSG11Q9UQ72 335 aa13.06□□□□□ -0.32
USB1-215ENST00000569252 TRBV6-7A0A0A0MS04 114 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 LEUTXA8MZ59 168 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 ZNF736B4DX44 427 aaPredicted RBP13.05□□□□□ -0.32
USB1-215ENST00000569252 GSTZ1O43708 216 aaPredicted RBP13.05□□□□□ -0.32
USB1-215ENST00000569252 PMP2P02689 132 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 CSF1P09603 554 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 EPHA1P21709 976 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 PPP1CCP36873 323 aaKnown RBP13.05□□□□□ -0.32
USB1-215ENST00000569252 RAB7AP51149 207 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 ARHGDIBP52566 201 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 TAS2R19P59542 299 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 AP3S2P59780 193 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 DGCR2P98153 550 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 CDK10Q15131 360 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 KIAA2026Q5HYC2 2103 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 LY6G6FQ5SQ64 297 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 MINOS1Q5TGZ0 78 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 RBMS3Q6XE24 437 aaKnown RBP13.05□□□□□ -0.32
USB1-215ENST00000569252 BRD3OSQ6XYD6 125 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 Q6ZPA2 131 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 C5orf24Q7Z6I8 188 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 GDPD1Q8N9F7 314 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 C8orf31Q8N9H6 132 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 MMP28Q9H239 520 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 GHITMQ9H3K2 345 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 TBL2Q9Y4P3 447 aaKnown RBP13.05□□□□□ -0.32
USB1-215ENST00000569252 MINOS1-NBL1R4GNA1 71 aa13.05□□□□□ -0.32
USB1-215ENST00000569252 OR5H8P0DN80 308 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 NAT1P18440 290 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 KLF17Q5JT82 389 aaPredicted RBP13.04□□□□□ -0.32
USB1-215ENST00000569252 TRIQKQ629K1 86 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 ZNF626Q68DY1 528 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 TMEM17Q86X19 198 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 TMEM229BQ8NBD8 167 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 MALSU1Q96EH3 234 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 CABLES2Q9BTV7 478 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 ABHD14AQ9BUJ0 271 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 RDH8Q9NYR8 311 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 EHFQ9NZC4 300 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 OR1A1Q9P1Q5 309 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 DPM3Q9P2X0 92 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 ZNF107Q9UII5 783 aaPredicted RBP13.04□□□□□ -0.32
USB1-215ENST00000569252 ZNF221Q9UK13 617 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 V9GYH0 126 aa13.04□□□□□ -0.32
USB1-215ENST00000569252 IGKV1D-8A0A087WSZ0 117 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 A0A1W2PPE3 182 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 TBPP20226 339 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 GNMTQ14749 295 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 ZNF846Q147U1 533 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 RUSC1-AS1Q66K80 236 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 HCP5Q6MZN7 132 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 LYG1Q8N1E2 194 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 LINC00311Q8N616 119 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 OR6F1Q8NGZ6 308 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 SNAPC3Q92966 411 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 WDR12Q9GZL7 423 aaKnown RBP13.03□□□□□ -0.32
USB1-215ENST00000569252 OCEL1Q9H607 264 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 PIPOXQ9P0Z9 390 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 ANAPC10Q9UM13 185 aa13.03□□□□□ -0.32
USB1-215ENST00000569252 DSCAML1Q8TD84 2053 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 IGKV1-6A0A0C4DH72 117 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 BUB1B-PAK6H3BSN5 160 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 ITGB1BP1O14713 200 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 FBP1P09467 338 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 NFYAP23511 347 aaPredicted RBP13.02□□□□□ -0.33
USB1-215ENST00000569252 FCGR2CP31995 323 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 HRH1P35367 487 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 SAA4P35542 130 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 FAUP35544 74 aaKnown RBP13.02□□□□□ -0.33
USB1-215ENST00000569252 RFX2P48378 723 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 HERV-K104P61576 105 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 MEF2DQ14814 521 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 HLA-DRB5Q30154 266 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 RNASE10Q5GAN6 216 aaKnown RBP13.02□□□□□ -0.33
USB1-215ENST00000569252 CT45A1Q5HYN5 189 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 ZNF57Q68EA5 555 aaPredicted RBP13.02□□□□□ -0.33
USB1-215ENST00000569252 CCDC144NLQ6NUI1 221 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 SLC25A48Q6ZT89 311 aaKnown RBP13.02□□□□□ -0.33
USB1-215ENST00000569252 LYSMD2Q8IV50 215 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 TOMM5Q8N4H5 51 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.02□□□□□ -0.33
USB1-215ENST00000569252 CT45A3Q8NHU0 189 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 FAM216AQ8WUB2 273 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 C22orf15Q8WYQ4 148 aa13.02□□□□□ -0.33
USB1-215ENST00000569252 RPEQ96AT9 228 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms