RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 KRTAP21-3Q3LHN1 58 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 TPTE2P1Q5T6R2 138 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 LIAT1Q6ZQX7 453 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 OR8H3Q8N146 312 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 ZDHHC22Q8N966 263 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 ZNF439Q8NDP4 499 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 OR10J5Q8NHC4 309 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 TMEM158Q8WZ71 300 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 SSX3Q99909 188 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 GINS4Q9BRT9 223 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 GHITMQ9H3K2 345 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 RAB18Q9NP72 206 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 ESM1Q9NQ30 184 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 RABL2AQ9UBK7 228 aaPredicted RBP9.85□□□□□ -0.83
SF3B3-208ENST00000567250 EXTL2Q9UBQ6 330 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 ZNF230Q9UIE0 474 aaPredicted RBP9.85□□□□□ -0.83
SF3B3-208ENST00000567250 PITPNC1Q9UKF7 332 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 RABL2BQ9UNT1 228 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 HILPDAQ9Y5L2 63 aa9.85□□□□□ -0.83
SF3B3-208ENST00000567250 CUBNO60494 3623 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 ITGB1BP1O14713 200 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 BET1O15155 118 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 SSX5O60225 188 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 IGHV4-59P01825 116 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 PRSS3P35030 304 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 ZNF137PP52743 207 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 ARPC4P59998 168 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 ZNF816Q0VGE8 651 aaPredicted RBP9.84□□□□□ -0.83
SF3B3-208ENST00000567250 PLA1AQ53H76 456 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 LAX1Q8IWV1 398 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 BEST4Q8NFU0 473 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 MCFD2Q8NI22 146 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 C17orf50Q8WW18 174 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 MAFIPQ8WZ33 124 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 AJUBAQ96IF1 538 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 DUX5Q96PT3 197 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 DCUN1D5Q9BTE7 237 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 ST6GALNAC5Q9BVH7 336 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 SLIRPQ9GZT3 109 aaKnown RBP9.84□□□□□ -0.83
SF3B3-208ENST00000567250 SCPEP1Q9HB40 452 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 PIPOXQ9P0Z9 390 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 ANXA10Q9UJ72 324 aa9.84□□□□□ -0.83
SF3B3-208ENST00000567250 ELF5Q9UKW6 265 aaPredicted RBP9.84□□□□□ -0.83
SF3B3-208ENST00000567250 TRBV6-7A0A0A0MS04 114 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 A0A1W2PPE3 182 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 LY6LH3BQJ8 138 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 SULT1C2O00338 296 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 GAPDHP04406 335 aaKnown RBP9.83□□□□□ -0.84
SF3B3-208ENST00000567250 CRYBA1P05813 215 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 GSTT2P0CG29 244 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 GSTT2BP0CG30 244 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 CEACAM6P40199 344 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 CT45A1Q5HYN5 189 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 LDLRAD2Q5SZI1 272 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 FAM71F2Q6NXP2 309 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 CNIH2Q6PI25 160 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 HOGA1Q86XE5 327 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 TGIF2LXQ8IUE1 241 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 LYG1Q8N1E2 194 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 CT45A3Q8NHU0 189 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 DGCR14Q96DF8 476 aaKnown RBP9.83□□□□□ -0.84
SF3B3-208ENST00000567250 TOLLIPQ9H0E2 274 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 OR1A1Q9P1Q5 309 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 TCF19Q9Y242 345 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 MRPS7Q9Y2R9 242 aaKnown RBP9.83□□□□□ -0.84
SF3B3-208ENST00000567250 A3GALT2U3KPV4 340 aa9.83□□□□□ -0.84
SF3B3-208ENST00000567250 ATRQ13535 2644 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 RAB29O14966 203 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 SLC31A2O15432 143 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 LANCL1O43813 399 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 S100A5P33763 92 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 TAS2R46P59540 309 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 ACTBP60709 375 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 ACTG1P63261 375 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 MRPS10P82664 201 aaKnown RBP9.82□□□□□ -0.84
SF3B3-208ENST00000567250 HERPUD1Q15011 391 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 UTF1Q5T230 341 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 C16orf87Q6PH81 154 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 SNX29P2Q8IUI4 249 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 DYNAPQ8N1N2 210 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 DTX3Q8N9I9 347 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 DIRAS2Q96HU8 199 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 AKR1E2Q96JD6 320 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 S1PR3Q99500 378 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 CHIAQ9BZP6 476 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 NXF2Q9GZY0 626 aaKnown RBP9.82□□□□□ -0.84
SF3B3-208ENST00000567250 IFI27L2Q9H2X8 130 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 MMP27Q9H306 513 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 TNFRSF19Q9NS68 423 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 NECAP2Q9NVZ3 263 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 RDH8Q9NYR8 311 aa9.82□□□□□ -0.84
SF3B3-208ENST00000567250 RBM7Q9Y580 266 aaKnown RBP9.82□□□□□ -0.84
SF3B3-208ENST00000567250 IGHV1-3A0A0C4DH29 117 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 IGKV1-6A0A0C4DH72 117 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 A0A1W2PPI3 338 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 DPPA5A6NC42 116 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 CTDSP2O14595 271 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 ST8SIA5O15466 376 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 HLA-DQB1P01920 261 aa9.81□□□□□ -0.84
SF3B3-208ENST00000567250 PTHLHP12272 177 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms