RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 LYSTQ99698 3801 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 NABP2Q9BQ15 211 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 SELENOIQ9C0D9 397 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 OR2S2Q9NQN1 319 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 CKLFQ9UBR5 152 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 WSB1Q9Y6I7 421 aa6.67□□□□□ -1.34
CAPN3-213ENST00000565173 IGHV7-81A0A0B4J1V7 117 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 IRGMA1A4Y4 181 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 UBE2QL1A1L167 161 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 YPEL1O60688 119 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 CRTAPO75718 401 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-213ENST00000565173 HLA-DRB1P01911 266 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 OR5H8P0DN80 308 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 MGMTP16455 207 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 MYL12AP19105 171 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 MYF6P23409 242 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 PPP1CCP36873 323 aaKnown RBP6.66□□□□□ -1.34
CAPN3-213ENST00000565173 RAB9AP51151 201 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 ACTBP60709 375 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 GNB1P62873 340 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 HTD2P86397 168 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 ST3GAL4Q11206 333 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 MMDQ15546 238 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF260Q3ZCT1 412 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 C19orf54Q5BKX5 351 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 TRAT1Q6PIZ9 186 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF833PQ6ZTB9 187 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 JAGN1Q8N5M9 183 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 MINDY2Q8NBR6 621 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 NPBQ8NG41 125 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 OR1N2Q8NGR9 330 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 CNBD2Q96M20 576 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 YPEL2Q96QA6 119 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 ASCL2Q99929 193 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 ABHD14AQ9BUJ0 271 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 MRPL20Q9BYC9 149 aaKnown RBP6.66□□□□□ -1.34
CAPN3-213ENST00000565173 ANKRD60Q9BZ19 345 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 OR51J1Q9H342 316 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 RAB9BQ9NP90 201 aa6.66□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF256Q9Y2P7 627 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-213ENST00000565173 PNMA8CA0A1B0GUJ8 204 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 EFCAB10A6NFE3 127 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 ATP6V0E1O15342 81 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 SOX15O60248 233 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 PDCD6O75340 191 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 NDUFA3O95167 84 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 CD1AP06126 327 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 CELP19835 753 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 CHATP28329 748 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 OR3A3P47888 321 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 INSL3P51460 131 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF616Q08AN1 781 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 C5orf64Q2M2E5 130 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 FBLIM1Q8WUP2 373 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 FAM46BQ96A09 425 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 OR5B12Q96R08 314 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 SULT4A1Q9BR01 284 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF251Q9BRH9 671 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 UQCC2Q9BRT2 126 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 Q9H521 79 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 TPSG1Q9NRR2 321 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 CHCHD3Q9NX63 227 aaKnown RBP6.65□□□□□ -1.34
CAPN3-213ENST00000565173 JPT1Q9UK76 154 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 RAB26Q9ULW5 256 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 VSIG4Q9Y279 399 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 FBXO7Q9Y3I1 522 aa6.65□□□□□ -1.34
CAPN3-213ENST00000565173 SAA2-SAA4A0A096LPE2 208 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 TRAV41A0A0B4J266 112 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 FCN1O00602 326 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 NBR2O15453 112 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 OR8U8P0C7N1 319 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 SAA2P0DJI9 122 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-213ENST00000565173 CD37P11049 281 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 EGR2P11161 476 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-213ENST00000565173 BLVRBP30043 206 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-213ENST00000565173 CRIP2P52943 208 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-213ENST00000565173 TAS2R43P59537 309 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 NDPQ00604 133 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 MED21Q13503 144 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 INSL4Q14641 139 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 HMGN3Q15651 99 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 OR10K2Q6IF99 312 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 LIN54Q6MZP7 749 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 ZNF880Q6PDB4 577 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 TMEM65Q6PI78 240 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 AHSA2Q719I0 299 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 DCUN1D4Q92564 292 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 DLX4Q92988 240 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-213ENST00000565173 GALMQ96C23 342 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 ALX4Q9H161 411 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-213ENST00000565173 IFI27L2Q9H2X8 130 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 PARP11Q9NR21 331 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 PLCXD1Q9NUJ7 323 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 SCN3BQ9NY72 215 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 KCNIP1Q9NZI2 227 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 CNOT2Q9NZN8 540 aaKnown RBP6.64□□□□□ -1.35
CAPN3-213ENST00000565173 GHRLQ9UBU3 117 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 PSORS1C1Q9UIG5 152 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 LRRC42Q9Y546 428 aa6.64□□□□□ -1.35
CAPN3-213ENST00000565173 NUBP2Q9Y5Y2 271 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms