RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 PPP1R27Q86WC6 154 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OR10AD1Q8NGE0 317 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OR6N1Q8NGY5 312 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 ZFAND1Q8TCF1 268 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 ZNF675Q8TD23 568 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 MRGPRDQ8TDS7 321 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 BLNKQ8WV28 456 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 MAFIPQ8WZ33 124 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 LZICQ8WZA0 190 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 YIPF5Q969M3 257 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 FAM19A4Q96LR4 140 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OR52E6Q96RD3 313 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OR8D2Q9GZM6 311 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 COMMD9Q9P000 198 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 MTFP1Q9UDX5 166 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 VSIG4Q9Y279 399 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 RP1P56715 2156 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 CNOT1A5YKK6 2376 aaKnown RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 GVINP1Q7Z2Y8 2422 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 LRP4O75096 1905 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 PLXNB3Q9ULL4 1909 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 TRAV8-4A0A0B4J246 113 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 PRORSD1PA6NEY8 169 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 PRSS44E7EML9 344 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 K7N7A8 449 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 SAP18O00422 153 aaKnown RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 ARPC5O15511 151 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 FGF17O60258 216 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 EDF1O60869 148 aaKnown RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 KLF7O75840 302 aaPredicted RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 SOX14O95416 240 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 P01737 135 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OR8U8P0C7N1 319 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 CRABP1P29762 137 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 AQP1P29972 269 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 IL2RGP31785 369 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 VDAC2P45880 294 aaPredicted RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 COPZ1P61923 177 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 PPP1CAP62136 330 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 FLI1Q01543 452 aaPredicted RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 COL10A1Q03692 680 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 BAXQ07812 192 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 SPCS2Q15005 226 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 NRF1Q16656 503 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 IZUMO4Q1ZYL8 232 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OLIG3Q7RTU3 272 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 NFE4Q86UQ8 179 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 ZNF440Q8IYI8 595 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 METTL27Q8N6F8 245 aaPredicted RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 CHST4Q8NCG5 386 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OR2Z1Q8NG97 314 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OR11G2Q8NGC1 345 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OR10K1Q8NGX5 313 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 OR1P1Q8NH06 330 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 Q8WTZ3 238 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 TM4SF18Q96CE8 201 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 RMND5BQ96G75 393 aaPredicted RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 CLEC7AQ9BXN2 247 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 SLIRPQ9GZT3 109 aaKnown RBP4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 TPK1Q9H3S4 243 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 RAB22AQ9UL26 194 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 SIGLEC9Q9Y336 463 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 PRELID3BQ9Y3B1 194 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 ASB4Q9Y574 426 aa4.05□□□□□ -1.76
VPS35P1-201ENST00000563400 ASXL3Q9C0F0 2248 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 CACNA1AO00555 2505 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 URB1O60287 2271 aaKnown RBP4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 TRIOO75962 3097 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 CHP2O43745 196 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 NPIPB7O75200 414 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 MED6O75586 246 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 HAND1O96004 215 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 REG1AP05451 166 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 IL3P08700 152 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 IGLL1P15814 213 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 IGHV1-2P23083 117 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 HTR1EP28566 365 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 EIF1P41567 113 aaKnown RBP4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 PPOXP50336 477 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 POLR2JP52435 117 aaKnown RBP4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 CRISP3P54108 245 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 RBX1P62877 108 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 GNGT1P63211 74 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 IGLV3-21P80748 117 aaPredicted RBP4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 ZNF146Q15072 292 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 FAM71E1Q6IPT2 247 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 ZCCHC23Q6ZST2 131 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 SLC36A1Q7Z2H8 476 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 SKA3Q8IX90 412 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 SMIM20Q8N5G0 67 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 ZNF676Q8N7Q3 588 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 ARIH2OSQ8N7S6 290 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 NRACQ8N912 160 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 OR52E4Q8NGH9 312 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 OR52N1Q8NH53 320 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 ZFP90Q8TF47 636 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 BORCS5Q969J3 196 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 EXOSC8Q96B26 276 aaKnown RBP4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 ROPN1LQ96C74 230 aa4.04□□□□□ -1.76
VPS35P1-201ENST00000563400 SIGMAR1Q99720 223 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms