RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 ZNF625Q96I27 306 aaPredicted RBP0.97□□□□□ -2.25
DENND4A-205ENST00000562540 Q9BRP9 147 aa0.97□□□□□ -2.25
DENND4A-205ENST00000562540 MED18Q9BUE0 208 aa0.97□□□□□ -2.25
DENND4A-205ENST00000562540 MND1Q9BWT6 205 aa0.97□□□□□ -2.25
DENND4A-205ENST00000562540 AGPAT3Q9NRZ7 376 aa0.97□□□□□ -2.25
DENND4A-205ENST00000562540 STK38LQ9Y2H1 464 aa0.97□□□□□ -2.25
DENND4A-205ENST00000562540 SLIT2O94813 1529 aa0.97□□□□□ -2.25
DENND4A-205ENST00000562540 PTPRBP23467 1997 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 BAZ2BQ9UIF8 2168 aaKnown RBP0.96□□□□□ -2.26
DENND4A-205ENST00000562540 FLG2Q5D862 2391 aaPredicted RBP0.96□□□□□ -2.26
DENND4A-205ENST00000562540 LOC100506127A0A0U1RQW1 187 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 H3BPC8 53 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 SULT1C2O00338 296 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 PHYHO14832 338 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 SGCEO43556 437 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 STK16O75716 305 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 TNFAIP8O95379 198 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 TPM1P09493 284 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 ARL14EPLP0DKL9 152 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 ORM2P19652 201 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 LCN1P31025 176 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 TSPEAR-AS2P59090 65 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 ACTBP60709 375 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 RAB8AP61006 207 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 ACTG1P63261 375 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 FAM3AP98173 230 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 STX3Q13277 289 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 Q3ZCU0 254 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 FBXO48Q5FWF7 155 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 LGALS9CQ6DKI2 356 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 Q6ZSA8 131 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 VN1R4Q7Z5H5 301 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 DEFB119Q8N690 84 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 OR4X2Q8NGF9 303 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 CCDC12Q8WUD4 166 aaPredicted RBP0.96□□□□□ -2.26
DENND4A-205ENST00000562540 RORBQ92753 470 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 PPWD1Q96BP3 646 aaKnown RBP0.96□□□□□ -2.26
DENND4A-205ENST00000562540 ABHD14BQ96IU4 210 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 SERPINB11Q96P15 392 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 GPR22Q99680 433 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 PECRQ9BY49 303 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 CHST5Q9GZS9 411 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 LINC00527Q9UJ94 153 aa0.96□□□□□ -2.26
DENND4A-205ENST00000562540 CHD2O14647 1828 aaKnown RBP0.96□□□□□ -2.26
DENND4A-205ENST00000562540 COL4A2P08572 1712 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 IGLV3-9A0A075B6K5 115 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 IGKV2-29A2NJV5 120 aaPredicted RBP0.95□□□□□ -2.26
DENND4A-205ENST00000562540 GRIFINA4D1Z8 144 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 C9J4A7 227 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 LIN7AO14910 233 aaPredicted RBP0.95□□□□□ -2.26
DENND4A-205ENST00000562540 LIMS3P0CW19 117 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 LIMS4P0CW20 117 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 ESDP10768 282 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 SYT1P21579 422 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 OR1E2P47887 323 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 KCNJ3P48549 501 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 HINT1P49773 126 aaPredicted RBP0.95□□□□□ -2.26
DENND4A-205ENST00000562540 PSMD7P51665 324 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 AGTRAPQ6RW13 159 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 ZNF75CPQ92670 426 aaPredicted RBP0.95□□□□□ -2.26
DENND4A-205ENST00000562540 TMEM56Q96MV1 263 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 FAM210AQ96ND0 272 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 TRNT1Q96Q11 434 aaKnown RBP0.95□□□□□ -2.26
DENND4A-205ENST00000562540 CYTH2Q99418 400 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 UPK3BQ9BT76 320 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 ZNF426Q9BUY5 554 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 C16orf95Q9H693 158 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 DNAJC12Q9UKB3 198 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 POFUT2Q9Y2G5 429 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.95□□□□□ -2.26
DENND4A-205ENST00000562540 PUS1Q9Y606 427 aaKnown RBP eCLIP0.95□□□□□ -2.26
DENND4A-205ENST00000562540 COL6A6A6NMZ7 2263 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 RAB3GAP2Q9H2M9 1393 aa0.95□□□□□ -2.26
DENND4A-205ENST00000562540 PXDNLA1KZ92 1463 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 GOLGA8QA0A0J9YX86 632 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 LINC00862A6NCI5 91 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 ARRDC5A6NEK1 342 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 UBFD1O14562 309 aaKnown RBP0.94□□□□□ -2.26
DENND4A-205ENST00000562540 UGT2B11O75310 529 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 ASS1P00966 412 aaKnown RBP0.94□□□□□ -2.26
DENND4A-205ENST00000562540 SLC35E2BP0CK96 405 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 ATP6V0CP27449 155 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 EMP2P54851 167 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 C1DQ13901 141 aaKnown RBP0.94□□□□□ -2.26
DENND4A-205ENST00000562540 ZBTB6Q15916 424 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 AADACL4Q5VUY2 407 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 KRTAP5-10Q6L8G5 202 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 COPS6Q7L5N1 327 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 GLT6D1Q7Z4J2 308 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 SLC35F6Q8N357 371 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 TMEM75Q8N9X5 138 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 OR51H1Q8NH63 302 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 TAMM41Q96BW9 452 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 HBEGFQ99075 208 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 TBX5Q99593 518 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 UGT2B28Q9BY64 529 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 C11orf1Q9H5F2 150 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 GLS2Q9UI32 602 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 SNX12Q9UMY4 172 aa0.94□□□□□ -2.26
DENND4A-205ENST00000562540 MRPS16Q9Y3D3 137 aaKnown RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms