RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 CCDC144NLQ6NUI1 221 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 CNIH2Q6PI25 160 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 HOGA1Q86XE5 327 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 ZDHHC22Q8N966 263 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 ZNF439Q8NDP4 499 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 OR2AK2Q8NG84 335 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 OR5R1Q8NH85 324 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 EDARADDQ8WWZ3 215 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 MAFIPQ8WZ33 124 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 SSX3Q99909 188 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 TOLLIPQ9H0E2 274 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 MIXL1Q9H2W2 232 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 SCPEP1Q9HB40 452 aa13.24□□□□□ -0.29
USB1-206ENST00000562534 TRBV6-7A0A0A0MS04 114 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 SULT1C2O00338 296 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 GAPDHP04406 335 aaKnown RBP13.23□□□□□ -0.29
USB1-206ENST00000562534 LPLP06858 475 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 PTHLHP12272 177 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 BRS3P32247 399 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 RAB7AP51149 207 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 DYNLT3P51808 116 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 SLC9A3R2Q15599 337 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 LRRC75BQ2VPJ9 315 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 IGSF11Q5DX21 431 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 TPTE2P1Q5T6R2 138 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 FAM53AQ6NSI3 398 aaPredicted RBP13.23□□□□□ -0.29
USB1-206ENST00000562534 BEST4Q8NFU0 473 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 ZFAND2BQ8WV99 257 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 RPEQ96AT9 228 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 DIRAS2Q96HU8 199 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 ABCB10Q9NRK6 738 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 ANXA10Q9UJ72 324 aa13.23□□□□□ -0.29
USB1-206ENST00000562534 IGKV1-6A0A0C4DH72 117 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 BET1O15155 118 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 S100A5P33763 92 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 GNMTQ14749 295 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 SNX29P2Q8IUI4 249 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 LAX1Q8IWV1 398 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 DYNAPQ8N1N2 210 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 CABLES2Q9BTV7 478 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 ABHD14AQ9BUJ0 271 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 ESM1Q9NQ30 184 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 IFT46Q9NQC8 304 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 BATF3Q9NR55 127 aa13.22□□□□□ -0.29
USB1-206ENST00000562534 IGKV1D-8A0A087WSZ0 117 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 DNAJC9-AS1A6NH13 148 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 A6NHS1 94 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 IGHV4-59P01825 116 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 TNFSF8P32971 234 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 ZNF137PP52743 207 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 UBA52P62987 128 aaKnown RBP13.21□□□□□ -0.29
USB1-206ENST00000562534 HERPUD1Q15011 391 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 C16orf87Q6PH81 154 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 OR8H3Q8N146 312 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 LYG1Q8N1E2 194 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 GVQW1Q8N7I0 195 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 GPX8Q8TED1 209 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 FAM216AQ8WUB2 273 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 TOMM40LQ969M1 308 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 ST6GALNAC6Q969X2 333 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 GINS4Q9BRT9 223 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 C11orf54Q9H0W9 315 aaPredicted RBP13.21□□□□□ -0.29
USB1-206ENST00000562534 RDH8Q9NYR8 311 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 PIPOXQ9P0Z9 390 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 OR1A1Q9P1Q5 309 aa13.21□□□□□ -0.29
USB1-206ENST00000562534 RAB29O14966 203 aa13.2□□□□□ -0.3
USB1-206ENST00000562534 SLC31A2O15432 143 aa13.2□□□□□ -0.3
USB1-206ENST00000562534 RNASE1P07998 156 aaKnown RBP13.2□□□□□ -0.3
USB1-206ENST00000562534 NAT1P18440 290 aa13.2□□□□□ -0.3
USB1-206ENST00000562534 ARPC4P59998 168 aa13.2□□□□□ -0.3
USB1-206ENST00000562534 MRPS10P82664 201 aaKnown RBP13.2□□□□□ -0.3
USB1-206ENST00000562534 ZNF816Q0VGE8 651 aaPredicted RBP13.2□□□□□ -0.3
USB1-206ENST00000562534 FOXB2Q5VYV0 432 aa13.2□□□□□ -0.3
USB1-206ENST00000562534 PYHIN1Q6K0P9 492 aa13.2□□□□□ -0.3
USB1-206ENST00000562534 FCAMRQ8WWV6 532 aa13.2□□□□□ -0.3
USB1-206ENST00000562534 ABHD1Q96SE0 405 aa13.2□□□□□ -0.3
USB1-206ENST00000562534 AGMATQ9BSE5 352 aa13.2□□□□□ -0.3
USB1-206ENST00000562534 PITPNC1Q9UKF7 332 aa13.2□□□□□ -0.3
USB1-206ENST00000562534 MEIS3P1A6NDR6 274 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 FABP12A6NFH5 140 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 H3BUX3 64 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 HSD17B6O14756 317 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 TXNL1O43396 289 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 RBBP9O75884 186 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 PAX6P26367 422 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 RAB13P51153 203 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 THNSL2Q86YJ6 484 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 OR5AP2Q8NGF4 316 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 PIFOQ8TCI5 191 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 DUX5Q96PT3 197 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 S1PR3Q99500 378 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 TNFRSF19Q9NS68 423 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 NECAP2Q9NVZ3 263 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 ZNF221Q9UK13 617 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 ANAPC10Q9UM13 185 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 GAB2Q9UQC2 676 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 NF1P21359 2839 aa13.19□□□□□ -0.3
USB1-206ENST00000562534 ZFHX3Q15911 3703 aa13.18□□□□□ -0.3
USB1-206ENST00000562534 JMJD1CQ15652 2540 aa13.18□□□□□ -0.3
USB1-206ENST00000562534 LANCL1O43813 399 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms