RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 ZNF439Q8NDP4 499 aa11.32□□□□□ -0.6
IFT140-205ENST00000561954 OR52L2PQ8NGH6 319 aa11.32□□□□□ -0.6
IFT140-205ENST00000561954 OR10J5Q8NHC4 309 aa11.32□□□□□ -0.6
IFT140-205ENST00000561954 C17orf50Q8WW18 174 aa11.32□□□□□ -0.6
IFT140-205ENST00000561954 SSX3Q99909 188 aa11.32□□□□□ -0.6
IFT140-205ENST00000561954 GHITMQ9H3K2 345 aa11.32□□□□□ -0.6
IFT140-205ENST00000561954 IFT46Q9NQC8 304 aa11.32□□□□□ -0.6
IFT140-205ENST00000561954 SCTP09683 121 aa11.31□□□□□ -0.6
IFT140-205ENST00000561954 CTXN2P0C2S0 81 aa11.31□□□□□ -0.6
IFT140-205ENST00000561954 ELK1P19419 428 aa11.31□□□□□ -0.6
IFT140-205ENST00000561954 ZNF137PP52743 207 aa11.31□□□□□ -0.6
IFT140-205ENST00000561954 FAM71F2Q6NXP2 309 aa11.31□□□□□ -0.6
IFT140-205ENST00000561954 IZUMO1Q8IYV9 350 aa11.31□□□□□ -0.6
IFT140-205ENST00000561954 GINS4Q9BRT9 223 aa11.31□□□□□ -0.6
IFT140-205ENST00000561954 C6orf62Q9GZU0 229 aaPredicted RBP11.31□□□□□ -0.6
IFT140-205ENST00000561954 SCPEP1Q9HB40 452 aa11.31□□□□□ -0.6
IFT140-205ENST00000561954 ZNF230Q9UIE0 474 aaPredicted RBP11.31□□□□□ -0.6
IFT140-205ENST00000561954 ELF5Q9UKW6 265 aaPredicted RBP11.31□□□□□ -0.6
IFT140-205ENST00000561954 LY6LH3BQJ8 138 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 BET1O15155 118 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 SSX5O60225 188 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 PRSS3P35030 304 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 ARPC4P59998 168 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 ACTG1P63261 375 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 ZNF816Q0VGE8 651 aaPredicted RBP11.3□□□□□ -0.6
IFT140-205ENST00000561954 PLA1AQ53H76 456 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 LDLRAD2Q5SZI1 272 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 UTF1Q5T230 341 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 MCFD2Q8NI22 146 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 MAFIPQ8WZ33 124 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 DUX5Q96PT3 197 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 ST6GALNAC5Q9BVH7 336 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 CHIAQ9BZP6 476 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 SLIRPQ9GZT3 109 aaKnown RBP11.3□□□□□ -0.6
IFT140-205ENST00000561954 PIPOXQ9P0Z9 390 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 OR1A1Q9P1Q5 309 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 RABL2AQ9UBK7 228 aaPredicted RBP11.3□□□□□ -0.6
IFT140-205ENST00000561954 EXTL2Q9UBQ6 330 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 ANXA10Q9UJ72 324 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 RABL2BQ9UNT1 228 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 ATRQ13535 2644 aa11.3□□□□□ -0.6
IFT140-205ENST00000561954 TRBV6-7A0A0A0MS04 114 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 A0A1W2PPE3 182 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 SLC31A2O15432 143 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 GAPDHP04406 335 aaKnown RBP11.29□□□□□ -0.6
IFT140-205ENST00000561954 CRYBA1P05813 215 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 CEACAM6P40199 344 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 HERPUD1Q15011 391 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 CT45A1Q5HYN5 189 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 C16orf87Q6PH81 154 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 CNIH2Q6PI25 160 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 HOGA1Q86XE5 327 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 TGIF2LXQ8IUE1 241 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 LAX1Q8IWV1 398 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 LYG1Q8N1E2 194 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 DYNAPQ8N1N2 210 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 BEST4Q8NFU0 473 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 CT45A3Q8NHU0 189 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 RTN4IP1Q8WWV3 396 aaPredicted RBP11.29□□□□□ -0.6
IFT140-205ENST00000561954 DCUN1D5Q9BTE7 237 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 TOLLIPQ9H0E2 274 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 IFI27L2Q9H2X8 130 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 TNFRSF19Q9NS68 423 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 RDH8Q9NYR8 311 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 A3GALT2U3KPV4 340 aa11.29□□□□□ -0.6
IFT140-205ENST00000561954 IGKV1-6A0A0C4DH72 117 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 A0A1W2PPI3 338 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 RNF212BA8MTL3 300 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 SULT1C2O00338 296 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 RAB29O14966 203 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 LANCL1O43813 399 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 GPR137BO60478 399 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 GSTT2P0CG29 244 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 GSTT2BP0CG30 244 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 MRPS10P82664 201 aaKnown RBP11.28□□□□□ -0.6
IFT140-205ENST00000561954 KRTAP24-1Q3LI83 254 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 IGSF11Q5DX21 431 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 DHRS7BQ6IAN0 325 aaPredicted RBP11.28□□□□□ -0.6
IFT140-205ENST00000561954 CAPSLQ8WWF8 208 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 ST6GALNAC6Q969X2 333 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 DGCR14Q96DF8 476 aaKnown RBP11.28□□□□□ -0.6
IFT140-205ENST00000561954 AKR1E2Q96JD6 320 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 S1PR3Q99500 378 aa11.28□□□□□ -0.6
IFT140-205ENST00000561954 MRPS7Q9Y2R9 242 aaKnown RBP11.28□□□□□ -0.6
IFT140-205ENST00000561954 SAA2-SAA4A0A096LPE2 208 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 TIMM23O14925 209 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 ST8SIA5O15466 376 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 FAM106CPP0CH98 169 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 SAA2P0DJI9 122 aaPredicted RBP11.27□□□□□ -0.61
IFT140-205ENST00000561954 PAX6P26367 422 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 RCVRNP35243 200 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 ZNF134P52741 427 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 TAS2R46P59540 309 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 ACTBP60709 375 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 FAM53AQ6NSI3 398 aaPredicted RBP11.27□□□□□ -0.61
IFT140-205ENST00000561954 C16orf82Q7Z2V1 217 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 SNX29P2Q8IUI4 249 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 DTX3Q8N9I9 347 aa11.27□□□□□ -0.61
IFT140-205ENST00000561954 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms