RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 KCNAB3O43448 404 aa18.89■□□□□ 0.61
CDR2-202ENST00000561630 LANCL1O43813 399 aa18.89■□□□□ 0.61
CDR2-202ENST00000561630 MYL9P24844 172 aa18.89■□□□□ 0.61
CDR2-202ENST00000561630 VEGFCP49767 419 aa18.89■□□□□ 0.61
CDR2-202ENST00000561630 TCTEX1D4Q5JR98 221 aa18.89■□□□□ 0.61
CDR2-202ENST00000561630 HES5Q5TA89 166 aa18.89■□□□□ 0.61
CDR2-202ENST00000561630 OR56B1Q8NGI3 324 aa18.89■□□□□ 0.61
CDR2-202ENST00000561630 FCGR1BQ92637 280 aa18.89■□□□□ 0.61
CDR2-202ENST00000561630 TMEM272A0A1B0GTI8 110 aa18.88■□□□□ 0.61
CDR2-202ENST00000561630 IFITM5A6NNB3 132 aa18.88■□□□□ 0.61
CDR2-202ENST00000561630 ZNF736B4DX44 427 aaPredicted RBP18.88■□□□□ 0.61
CDR2-202ENST00000561630 MOSP00540 346 aa18.88■□□□□ 0.61
CDR2-202ENST00000561630 OR10A3P58181 314 aa18.88■□□□□ 0.61
CDR2-202ENST00000561630 ODF3L1Q8IXM7 274 aa18.88■□□□□ 0.61
CDR2-202ENST00000561630 OR4F17Q8NGA8 305 aa18.88■□□□□ 0.61
CDR2-202ENST00000561630 IL1F10Q8WWZ1 152 aa18.88■□□□□ 0.61
CDR2-202ENST00000561630 ARHGAP5-AS1Q96IT6 56 aa18.88■□□□□ 0.61
CDR2-202ENST00000561630 OR4F4Q96R69 305 aa18.88■□□□□ 0.61
CDR2-202ENST00000561630 HDHD3Q9BSH5 251 aaPredicted RBP18.88■□□□□ 0.61
CDR2-202ENST00000561630 RAB22AQ9UL26 194 aa18.88■□□□□ 0.61
CDR2-202ENST00000561630 PSMB9P28065 219 aa18.87■□□□□ 0.61
CDR2-202ENST00000561630 C22orf42Q6IC83 251 aa18.87■□□□□ 0.61
CDR2-202ENST00000561630 OR2AK2Q8NG84 335 aa18.87■□□□□ 0.61
CDR2-202ENST00000561630 OR4X2Q8NGF9 303 aa18.87■□□□□ 0.61
CDR2-202ENST00000561630 SETD6Q8TBK2 473 aa18.87■□□□□ 0.61
CDR2-202ENST00000561630 R3HDM4Q96D70 268 aa18.87■□□□□ 0.61
CDR2-202ENST00000561630 PECRQ9BY49 303 aa18.87■□□□□ 0.61
CDR2-202ENST00000561630 C12orf4Q9NQ89 552 aa18.87■□□□□ 0.61
CDR2-202ENST00000561630 PLSCR3Q9NRY6 295 aa18.87■□□□□ 0.61
CDR2-202ENST00000561630 NCBP2LA6PVI3 153 aaKnown RBP18.86■□□□□ 0.61
CDR2-202ENST00000561630 IGHG2P01859 326 aa18.86■□□□□ 0.61
CDR2-202ENST00000561630 RAB3BP20337 219 aa18.86■□□□□ 0.61
CDR2-202ENST00000561630 PLA2G7Q13093 441 aa18.86■□□□□ 0.61
CDR2-202ENST00000561630 PLAC9Q5JTB6 97 aa18.86■□□□□ 0.61
CDR2-202ENST00000561630 ZNF773Q6PK81 442 aa18.86■□□□□ 0.61
CDR2-202ENST00000561630 C10orf99Q6UWK7 81 aa18.86■□□□□ 0.61
CDR2-202ENST00000561630 OR8H1Q8NGG4 311 aa18.86■□□□□ 0.61
CDR2-202ENST00000561630 MGAT4AQ9UM21 535 aa18.86■□□□□ 0.61
CDR2-202ENST00000561630 TCRBV4S1A1TA0A5B7 111 aa18.85■□□□□ 0.61
CDR2-202ENST00000561630 FGF9P31371 208 aaPredicted RBP18.85■□□□□ 0.61
CDR2-202ENST00000561630 LSAMPQ13449 338 aa18.85■□□□□ 0.61
CDR2-202ENST00000561630 Q8N9W7 124 aa18.85■□□□□ 0.61
CDR2-202ENST00000561630 IFI27L2Q9H2X8 130 aa18.85■□□□□ 0.61
CDR2-202ENST00000561630 LIN7CQ9NUP9 197 aaKnown RBP18.85■□□□□ 0.61
CDR2-202ENST00000561630 RRP15Q9Y3B9 282 aaKnown RBP18.85■□□□□ 0.61
CDR2-202ENST00000561630 TSSC4Q9Y5U2 329 aaPredicted RBP18.85■□□□□ 0.61
CDR2-202ENST00000561630 PSMB11A5LHX3 300 aa18.84■□□□□ 0.61
CDR2-202ENST00000561630 ZNF833PQ6ZTB9 187 aa18.84■□□□□ 0.61
CDR2-202ENST00000561630 SLC35E3Q7Z769 313 aa18.84■□□□□ 0.61
CDR2-202ENST00000561630 NR2C2APQ86WQ0 139 aa18.84■□□□□ 0.61
CDR2-202ENST00000561630 CHPT1Q8WUD6 406 aa18.84■□□□□ 0.61
CDR2-202ENST00000561630 NOL4LQ96MY1 436 aaPredicted RBP18.84■□□□□ 0.61
CDR2-202ENST00000561630 S1PR3Q99500 378 aa18.84■□□□□ 0.61
CDR2-202ENST00000561630 CMSS1Q9BQ75 279 aaKnown RBP18.84■□□□□ 0.61
CDR2-202ENST00000561630 ABCG5Q9H222 651 aa18.84■□□□□ 0.61
CDR2-202ENST00000561630 Q9N2K0 584 aa18.84■□□□□ 0.61
CDR2-202ENST00000561630 SAA2-SAA4A0A096LPE2 208 aa18.83■□□□□ 0.6
CDR2-202ENST00000561630 A0A1W2PRX2 142 aa18.83■□□□□ 0.6
CDR2-202ENST00000561630 SERPINE3A8MV23 424 aa18.83■□□□□ 0.6
CDR2-202ENST00000561630 SAA2P0DJI9 122 aaPredicted RBP18.83■□□□□ 0.6
CDR2-202ENST00000561630 OR3A3P47888 321 aa18.83■□□□□ 0.6
CDR2-202ENST00000561630 HLA-DRB3P79483 266 aa18.83■□□□□ 0.6
CDR2-202ENST00000561630 RBMXL1Q96E39 390 aaKnown RBP18.83■□□□□ 0.6
CDR2-202ENST00000561630 MRPL20Q9BYC9 149 aaKnown RBP18.83■□□□□ 0.6
CDR2-202ENST00000561630 TXNL4BQ9NX01 149 aaKnown RBP18.83■□□□□ 0.6
CDR2-202ENST00000561630 SLC23A1Q9UHI7 598 aa18.83■□□□□ 0.6
CDR2-202ENST00000561630 STUB1Q9UNE7 303 aa18.83■□□□□ 0.6
CDR2-202ENST00000561630 KCNK7Q9Y2U2 307 aa18.83■□□□□ 0.6
CDR2-202ENST00000561630 ITGB1BP1O14713 200 aa18.82■□□□□ 0.6
CDR2-202ENST00000561630 RAB6AP20340 208 aa18.82■□□□□ 0.6
CDR2-202ENST00000561630 GPR12P47775 334 aa18.82■□□□□ 0.6
CDR2-202ENST00000561630 ZNF329Q86UD4 541 aa18.82■□□□□ 0.6
CDR2-202ENST00000561630 C1QL4Q86Z23 238 aa18.82■□□□□ 0.6
CDR2-202ENST00000561630 FOXRED2Q8IWF2 684 aa18.82■□□□□ 0.6
CDR2-202ENST00000561630 FAM71E2Q8N5Q1 922 aa18.82■□□□□ 0.6
CDR2-202ENST00000561630 RAB3CQ96E17 227 aa18.82■□□□□ 0.6
CDR2-202ENST00000561630 NABP2Q9BQ15 211 aa18.82■□□□□ 0.6
CDR2-202ENST00000561630 A0A0B4J203 849 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 LINC01548A6NM66 108 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 ST8SIA5O15466 376 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 ZBTB25P24278 435 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 F2RL1P55085 397 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 MOGAT2Q3SYC2 334 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 FAM71F2Q6NXP2 309 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 OR10R2Q8NGX6 335 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 PTX4Q96A99 478 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 RASL11BQ9BPW5 248 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 AGMATQ9BSE5 352 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 PARP12Q9H0J9 701 aaKnown RBP18.81■□□□□ 0.6
CDR2-202ENST00000561630 PIPOXQ9P0Z9 390 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 LINC00527Q9UJ94 153 aa18.81■□□□□ 0.6
CDR2-202ENST00000561630 NOTCH3Q9UM47 2321 aa18.8■□□□□ 0.6
CDR2-202ENST00000561630 RAB27BO00194 218 aa18.8■□□□□ 0.6
CDR2-202ENST00000561630 SCTP09683 121 aa18.8■□□□□ 0.6
CDR2-202ENST00000561630 CEACAM6P40199 344 aa18.8■□□□□ 0.6
CDR2-202ENST00000561630 KCTD21Q4G0X4 260 aa18.8■□□□□ 0.6
CDR2-202ENST00000561630 PDLIM3Q53GG5 364 aaPredicted RBP18.8■□□□□ 0.6
CDR2-202ENST00000561630 STPG2Q8N412 459 aa18.8■□□□□ 0.6
CDR2-202ENST00000561630 ZNF251Q9BRH9 671 aa18.8■□□□□ 0.6
CDR2-202ENST00000561630 OR1A1Q9P1Q5 309 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms