RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 PRO2289Q9P1D8 64 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 PUS1Q9Y606 427 aaKnown RBP eCLIP1.22□□□□□ -2.21
USP8-218ENST00000561330 CACNA1SQ13698 1873 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 TRPM6Q9BX84 2022 aa1.22□□□□□ -2.21
USP8-218ENST00000561330 DENND4BO75064 1496 aaPredicted RBP1.21□□□□□ -2.22
USP8-218ENST00000561330 GRIFINA4D1Z8 144 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 EFCAB9A8MZ26 197 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 C9J4A7 227 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 GPR171O14626 319 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 LYNX1P0DP58 116 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 TSPEAR-AS2P59090 65 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 UAP1Q16222 522 aaPredicted RBP1.21□□□□□ -2.22
USP8-218ENST00000561330 OR10J3Q5JRS4 329 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 GLT6D1Q7Z4J2 308 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 MTERF4Q7Z6M4 381 aaKnown RBP1.21□□□□□ -2.22
USP8-218ENST00000561330 DOLPP1Q86YN1 238 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 OR4P4Q8NGL7 312 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 OR5K1Q8NHB7 308 aa1.21□□□□□ -2.22
USP8-218ENST00000561330 LINC00862A6NCI5 91 aa1.2□□□□□ -2.22
USP8-218ENST00000561330 C11orf86A6NJI1 115 aa1.2□□□□□ -2.22
USP8-218ENST00000561330 LDOC1O95751 146 aaPredicted RBP1.2□□□□□ -2.22
USP8-218ENST00000561330 CCDC172P0C7W6 258 aa1.2□□□□□ -2.22
USP8-218ENST00000561330 TRMT12Q53H54 448 aaKnown RBP1.2□□□□□ -2.22
USP8-218ENST00000561330 TBX5Q99593 518 aa1.2□□□□□ -2.22
USP8-218ENST00000561330 TIMM21Q9BVV7 248 aa1.2□□□□□ -2.22
USP8-218ENST00000561330 CHST5Q9GZS9 411 aa1.2□□□□□ -2.22
USP8-218ENST00000561330 COMMD9Q9P000 198 aa1.2□□□□□ -2.22
USP8-218ENST00000561330 SNX12Q9UMY4 172 aa1.2□□□□□ -2.22
USP8-218ENST00000561330 MRPS16Q9Y3D3 137 aaKnown RBP1.2□□□□□ -2.22
USP8-218ENST00000561330 MDC1Q14676 2089 aaKnown RBP1.19□□□□□ -2.22
USP8-218ENST00000561330 IGKV1D-43A0A0B4J1Z2 117 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 A0A1B0GX12 115 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 TMEM235A6NFC5 223 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 NDUFS8O00217 210 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 GNRH2O43555 120 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 PLCH2O75038 1416 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 CST4P01036 141 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 ORM2P19652 201 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 ATP6V0CP27449 155 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 PSMB3P49720 205 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 OR10A3P58181 314 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 TTC33Q6PID6 262 aaPredicted RBP1.19□□□□□ -2.22
USP8-218ENST00000561330 Q6ZTI0 123 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 C2orf91Q6ZV80 131 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 COA5Q86WW8 74 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 LHFPL5Q8TAF8 219 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 HSPB9Q9BQS6 159 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 DNAJC12Q9UKB3 198 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 SDK1Q7Z5N4 2213 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 ADAMTSL1Q8N6G6 1762 aa1.19□□□□□ -2.22
USP8-218ENST00000561330 A0A1B0GVG6 124 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 C2orf74A8MZ97 194 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 M0QYV0 167 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 CRHBPP24387 322 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 MAGEA12P43365 314 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 RAP1GDS1P52306 607 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 KRTAP10-4P60372 401 aaPredicted RBP1.18□□□□□ -2.22
USP8-218ENST00000561330 ACTBP60709 375 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 ACTG1P63261 375 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 GTF2BQ00403 316 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 ZNF90Q03938 601 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 RAB31Q13636 194 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 PSG3Q16557 428 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 FNDC9Q8TBE3 224 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 FGF13Q92913 245 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 MSANTD3Q96H12 275 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 LINC00527Q9UJ94 153 aa1.18□□□□□ -2.22
USP8-218ENST00000561330 MED13Q9UHV7 2174 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 LAMB2P55268 1798 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 PHYHO14832 338 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 CCL2P13500 99 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 NQO2P16083 231 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 NPPCP23582 126 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 CDK2P24941 298 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 FGF12P61328 243 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 RELAQ04206 551 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 XRCC4Q13426 336 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 FAM201AQ5SY85 155 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.17□□□□□ -2.22
USP8-218ENST00000561330 TMEM75Q8N9X5 138 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 SPACA4Q8TDM5 124 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 TRNT1Q96Q11 434 aaKnown RBP1.17□□□□□ -2.22
USP8-218ENST00000561330 BABAM2Q9NXR7 383 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 HHLA2Q9UM44 414 aa1.17□□□□□ -2.22
USP8-218ENST00000561330 ZW10O43264 779 aa1.16□□□□□ -2.22
USP8-218ENST00000561330 STK16O75716 305 aa1.16□□□□□ -2.22
USP8-218ENST00000561330 OPRM1P35372 400 aa1.16□□□□□ -2.22
USP8-218ENST00000561330 OR1E2P47887 323 aa1.16□□□□□ -2.22
USP8-218ENST00000561330 ERHP84090 104 aaKnown RBP1.16□□□□□ -2.22
USP8-218ENST00000561330 CCDC127Q96BQ5 260 aa1.16□□□□□ -2.22
USP8-218ENST00000561330 TAMM41Q96BW9 452 aa1.16□□□□□ -2.22
USP8-218ENST00000561330 ABHD14BQ96IU4 210 aa1.16□□□□□ -2.22
USP8-218ENST00000561330 MRM2Q9UI43 246 aaKnown RBP1.16□□□□□ -2.22
USP8-218ENST00000561330 ZNF638Q14966 1978 aaKnown RBP1.16□□□□□ -2.22
USP8-218ENST00000561330 DNMT1P26358 1616 aaKnown RBP1.15□□□□□ -2.22
USP8-218ENST00000561330 SGCEO43556 437 aa1.15□□□□□ -2.23
USP8-218ENST00000561330 CD7P09564 240 aa1.15□□□□□ -2.23
USP8-218ENST00000561330 RPL14P50914 215 aaKnown RBP1.15□□□□□ -2.23
USP8-218ENST00000561330 FAM3AP98173 230 aa1.15□□□□□ -2.23
USP8-218ENST00000561330 HSP90B2PQ58FF3 399 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms