RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ARHGAP5-AS1Q96IT6 56 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 NABP2Q9BQ15 211 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 ZNF251Q9BRH9 671 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 PECRQ9BY49 303 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 JPT1Q9UK76 154 aa9.98□□□□□ -0.81
CHRNA3-208ENST00000561128 PRKDCP78527 4128 aaKnown RBP9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 TCRBV4S1A1TA0A5B7 111 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 PSMB11A5LHX3 300 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 M0QZK8 103 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 FGF16O43320 207 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 LANCL1O43813 399 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 IGHG2P01859 326 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 SLC2A2P11168 524 aaPredicted RBP9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 ARSBP15848 533 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 GPR12P47775 334 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 VEGFCP49767 419 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 LINC00205P59089 165 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 GABARAPL2P60520 117 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 C2orf76Q3KRA6 126 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 RPL39P5Q59GN2 51 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 KHDC1LQ5JSQ8 128 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 C22orf42Q6IC83 251 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 TRAT1Q6PIZ9 186 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 TGIF2LXQ8IUE1 241 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 FAM71E2Q8N5Q1 922 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 SETD6Q8TBK2 473 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 IL1F10Q8WWZ1 152 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 FAM3DQ96BQ1 224 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 V9GY05 133 aa9.97□□□□□ -0.81
CHRNA3-208ENST00000561128 SERPINE3A8MV23 424 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 YPEL1O60688 119 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 PROP1O75360 226 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 ARL6IP5O75915 188 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 MOSP00540 346 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 SCTP09683 121 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 CD3GP09693 182 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 IGLL1P15814 213 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 PSMA1P25786 263 aaKnown RBP9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 CD1BP29016 333 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 HLA-DRB3P79483 266 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 HTD2P86397 168 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 TRAM1Q15629 374 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 TMEM30BQ3MIR4 351 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 UBE2UQ5VVX9 321 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 GLDNQ6ZMI3 551 aaPredicted RBP9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 ZNF833PQ6ZTB9 187 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 SLC35E3Q7Z769 313 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 ZNF554Q86TJ5 538 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 STPG2Q8N412 459 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 OR2T10Q8NGZ9 312 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 PHF21AQ96BD5 680 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 C5orf30Q96GV9 206 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 ABHD14BQ96IU4 210 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 DUX3Q96PT4 197 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 YPEL2Q96QA6 119 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 S1PR3Q99500 378 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 ABCG5Q9H222 651 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 RNF167Q9H6Y7 350 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 CHMP1AQ9HD42 196 aaPredicted RBP9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 PLEKHJ1Q9NW61 149 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 KCNIP1Q9NZI2 227 aa9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 ELF5Q9UKW6 265 aaPredicted RBP9.96□□□□□ -0.82
CHRNA3-208ENST00000561128 TRBV6-6A0A0A6YYG2 114 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 NCBP2LA6PVI3 153 aaKnown RBP9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 IL3RAP26951 378 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 PSMB9P28065 219 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 NDPQ00604 133 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 CFHR3Q02985 330 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 DTX3Q8N9I9 347 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 OR4X2Q8NGF9 303 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 MAFIPQ8WZ33 124 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 GALMQ96C23 342 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 Q9N2K0 584 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 STEAP1Q9UHE8 339 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 ZNF107Q9UII5 783 aaPredicted RBP9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 BLOC1S6Q9UL45 172 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 TSSC4Q9Y5U2 329 aaPredicted RBP9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 NOTCH3Q9UM47 2321 aa9.95□□□□□ -0.82
CHRNA3-208ENST00000561128 TRAV1-2A0A0B4J238 106 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 TRDV1A0A1B0GX56 115 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 IFITM5A6NNB3 132 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 MFNGO00587 321 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 DENRO43583 198 aaKnown RBP9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 CLEC2LP0C7M8 214 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 RPL23AP62750 156 aaKnown RBP9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 FAM131AQ6UXB0 335 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 C8orf86Q6ZUL3 223 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 LINC00482Q8N8I6 264 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 OR4F17Q8NGA8 305 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 OR4F4Q96R69 305 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 AGMATQ9BSE5 352 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 URM1Q9BTM9 101 aaKnown RBP9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 C12orf4Q9NQ89 552 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 LIN7CQ9NUP9 197 aaKnown RBP9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 SLC23A1Q9UHI7 598 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 HSF4Q9ULV5 492 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 FBXO7Q9Y3I1 522 aa9.94□□□□□ -0.82
CHRNA3-208ENST00000561128 IGKV1D-8A0A087WSZ0 117 aa9.93□□□□□ -0.82
CHRNA3-208ENST00000561128 RAB27BO00194 218 aa9.93□□□□□ -0.82
CHRNA3-208ENST00000561128 TXNL1O43396 289 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms