RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GTSCR1Q86UQ5 136 aa14.16□□□□□ -0.14
TPM1-226ENST00000560959 PRR18Q8N4B5 295 aa14.16□□□□□ -0.14
TPM1-226ENST00000560959 CASTOR1Q8WTX7 329 aa14.16□□□□□ -0.14
TPM1-226ENST00000560959 MRPS24Q96EL2 167 aaKnown RBP14.16□□□□□ -0.14
TPM1-226ENST00000560959 MBNL3Q9NUK0 354 aaKnown RBP14.16□□□□□ -0.14
TPM1-226ENST00000560959 ETAA1Q9NY74 926 aa14.16□□□□□ -0.14
TPM1-226ENST00000560959 CNOT2Q9NZN8 540 aaKnown RBP14.16□□□□□ -0.14
TPM1-226ENST00000560959 JPT1Q9UK76 154 aa14.16□□□□□ -0.14
TPM1-226ENST00000560959 RRHO14718 337 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 YPEL1O60688 119 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 SC5DO75845 299 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 GLAP06280 429 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 RCC1P18754 421 aaPredicted RBP14.15□□□□□ -0.14
TPM1-226ENST00000560959 ADARB1P78563 741 aaKnown RBP14.15□□□□□ -0.14
TPM1-226ENST00000560959 HTD2P86397 168 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 KLF5Q13887 457 aaPredicted RBP14.15□□□□□ -0.14
TPM1-226ENST00000560959 LRRC36Q1X8D7 754 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 MOGAT2Q3SYC2 334 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 FAM71F2Q6NXP2 309 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 CCDC197Q8NCU1 140 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 OR4K15Q8NH41 348 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 GPR148Q8TDV2 347 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 LGALS12Q96DT0 336 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 YPEL2Q96QA6 119 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 HIPK2Q9H2X6 1198 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 TAF9BQ9HBM6 251 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 SIGLEC8Q9NYZ4 499 aa14.15□□□□□ -0.14
TPM1-226ENST00000560959 FRAS1Q86XX4 4008 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 E9PI62 339 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 TFAP2AP05549 437 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 GBX2P52951 348 aaPredicted RBP14.14□□□□□ -0.15
TPM1-226ENST00000560959 TPPP2P59282 170 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 DDI2Q5TDH0 399 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 ZNF562Q6V9R5 426 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 IL34Q6ZMJ4 242 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 AMIGO2Q86SJ2 522 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 PPP1R27Q86WC6 154 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 RNF5Q99942 180 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 TMED9Q9BVK6 235 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 FBXL15Q9H469 300 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 AP4S1Q9Y587 144 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 TNCP24821 2201 aa14.14□□□□□ -0.15
TPM1-226ENST00000560959 FCN1O00602 326 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 FADS2O95864 444 aaKnown RBP14.13□□□□□ -0.15
TPM1-226ENST00000560959 FCGR1AP12314 374 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 BDKRB2P30411 391 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 SOX2P48431 317 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 PPP3R1P63098 170 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 SLC22A6Q4U2R8 563 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 LCN12Q6JVE5 192 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 UNQ5815/PRO19632Q6UWF5 114 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 OR9G4Q8NGQ1 327 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 TMEM106AQ96A25 262 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 MS4A10Q96PG2 267 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 KCNIP1Q9NZI2 227 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 LRRC42Q9Y546 428 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 A3GALT2U3KPV4 340 aa14.13□□□□□ -0.15
TPM1-226ENST00000560959 A0A0G2JLM5 398 aa14.12□□□□□ -0.15
TPM1-226ENST00000560959 FAM90A7PA6NKC0 464 aa14.12□□□□□ -0.15
TPM1-226ENST00000560959 FAM90A23PA8MXZ1 464 aa14.12□□□□□ -0.15
TPM1-226ENST00000560959 H3BUA1 57 aa14.12□□□□□ -0.15
TPM1-226ENST00000560959 MC5RP33032 325 aa14.12□□□□□ -0.15
TPM1-226ENST00000560959 RAB12Q6IQ22 244 aa14.12□□□□□ -0.15
TPM1-226ENST00000560959 Q8N402 240 aa14.12□□□□□ -0.15
TPM1-226ENST00000560959 OR52L2PQ8NGH6 319 aa14.12□□□□□ -0.15
TPM1-226ENST00000560959 RGP1Q92546 391 aaPredicted RBP14.12□□□□□ -0.15
TPM1-226ENST00000560959 ERVK13-1Q9NX77 482 aa14.12□□□□□ -0.15
TPM1-226ENST00000560959 CEPT1Q9Y6K0 416 aa14.12□□□□□ -0.15
TPM1-226ENST00000560959 SAA2-SAA4A0A096LPE2 208 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 A0A1W2PP11 408 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 SHISA3A0PJX4 238 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 RBBP9O75884 186 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 TRGV3P03979 118 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 SAA2P0DJI9 122 aaPredicted RBP14.11□□□□□ -0.15
TPM1-226ENST00000560959 PPP1CCP36873 323 aaKnown RBP14.11□□□□□ -0.15
TPM1-226ENST00000560959 OR3A3P47888 321 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 GNMTQ14749 295 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 PLGLAQ15195 96 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 CCDC58Q4VC31 144 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 LFNGQ8NES3 379 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 ABHD5Q8WTS1 349 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 LINC00476Q8WZB0 136 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 SLC7A6OSQ96CW6 309 aaPredicted RBP14.11□□□□□ -0.15
TPM1-226ENST00000560959 PIPOXQ9P0Z9 390 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 OAZ3Q9UMX2 235 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 PEX16Q9Y5Y5 336 aa14.11□□□□□ -0.15
TPM1-226ENST00000560959 OR5H14A6NHG9 310 aa14.1□□□□□ -0.15
TPM1-226ENST00000560959 SLC25A17O43808 307 aa14.1□□□□□ -0.15
TPM1-226ENST00000560959 GPX5O75715 221 aa14.1□□□□□ -0.15
TPM1-226ENST00000560959 TATDN3Q17R31 274 aa14.1□□□□□ -0.15
TPM1-226ENST00000560959 RPL22L1Q6P5R6 122 aaKnown RBP14.1□□□□□ -0.15
TPM1-226ENST00000560959 OR2AK2Q8NG84 335 aa14.1□□□□□ -0.15
TPM1-226ENST00000560959 OR2K2Q8NGT1 345 aa14.1□□□□□ -0.15
TPM1-226ENST00000560959 GALMQ96C23 342 aa14.1□□□□□ -0.15
TPM1-226ENST00000560959 CENPNQ96H22 339 aaPredicted RBP14.1□□□□□ -0.15
TPM1-226ENST00000560959 RDH12Q96NR8 316 aa14.1□□□□□ -0.15
TPM1-226ENST00000560959 HERC2O95714 4834 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 C13orf42A0A1B0GVH6 325 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 RAB29O14966 203 aa14.09□□□□□ -0.15
TPM1-226ENST00000560959 BRI3O95415 125 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms