RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 RER1O15258 196 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 SSSCA1O60232 199 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 KBTBD11O94819 623 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 HRASP01112 189 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 P04436 131 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 SERPINE2P07093 398 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 CELA2AP08217 269 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 SOD3P08294 240 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 CST2P09228 141 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 CXCL1P09341 107 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 LINC00614P0C842 121 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 OR10J1P30954 320 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 GNRHRP30968 328 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 APLNRP35414 380 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 MDH2P40926 338 aaKnown RBP7.34□□□□□ -1.23
CCDC33-209ENST00000560565 CYB561P49447 251 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 TNFSF10P50591 281 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 FXYD4P59646 89 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 ERVFRD-1P60508 538 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 ERVFC1-1P60608 527 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 ENDOGQ14249 297 aaKnown RBP7.34□□□□□ -1.23
CCDC33-209ENST00000560565 NRN1LQ496H8 165 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 COX19Q49B96 90 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 PHLDA2Q53GA4 152 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 SPIN3Q5JUX0 258 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 ABHD17BQ5VST6 288 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 FAM27BQ5VT28 67 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 SP5Q6BEB4 398 aaPredicted RBP7.34□□□□□ -1.23
CCDC33-209ENST00000560565 MOB1BQ7L9L4 216 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 OR52M1Q8NGK5 317 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 THOC3Q96J01 351 aaKnown RBP7.34□□□□□ -1.23
CCDC33-209ENST00000560565 MEGF10Q96KG7 1140 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 SPACA5Q96QH8 159 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 NEU1Q99519 415 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 RARRES2Q99969 163 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 PARP12Q9H0J9 701 aaKnown RBP7.34□□□□□ -1.23
CCDC33-209ENST00000560565 ZNF552Q9H707 407 aaPredicted RBP7.34□□□□□ -1.23
CCDC33-209ENST00000560565 ZNF442Q9H7R0 627 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 PRR13Q9NZ81 148 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 GNG13Q9P2W3 67 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 B3GAT1Q9P2W7 334 aa7.34□□□□□ -1.23
CCDC33-209ENST00000560565 CACNA1CQ13936 2221 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 HIVEP3Q5T1R4 2406 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 ZNF816-ZNF321PA0A0X1KG74 233 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 A0A1B0GV90 55 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 IGSF23A1L1A6 192 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 XKRY2A2RUG3 117 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 FAM24AA6NFZ4 105 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 IFITM10A6NMD0 228 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 C17orf112F2Z3M2 114 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 F5H5K5 113 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 PHOX2AO14813 284 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 DHHO43323 396 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 CYTIPO60759 359 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 CBR3O75828 277 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 NRASP01111 189 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 GALR1P47211 349 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 FHITP49789 147 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 DYNLT3P51808 116 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 DSCR4P56555 118 aaPredicted RBP7.33□□□□□ -1.24
CCDC33-209ENST00000560565 PAFAH1B2P68402 229 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 RNPS1Q15287 305 aaKnown RBP7.33□□□□□ -1.24
CCDC33-209ENST00000560565 BSXQ3C1V8 233 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 TMEM42Q69YG0 159 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 IGFL3Q6UXB1 125 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 MEX3BQ6ZN04 569 aaKnown RBP7.33□□□□□ -1.24
CCDC33-209ENST00000560565 TBC1D26Q86UD7 250 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 C20orf196Q8IYI0 205 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 SELENOHQ8IZQ5 122 aaKnown RBP7.33□□□□□ -1.24
CCDC33-209ENST00000560565 GPR137CQ8N3F9 429 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 ZADH2Q8N4Q0 377 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 RBMXL3Q8N7X1 1067 aaKnown RBP7.33□□□□□ -1.24
CCDC33-209ENST00000560565 Q8NFD4 153 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 FRZBQ92765 325 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 PIGTQ969N2 578 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 RBM14Q96PK6 669 aaKnown RBP7.33□□□□□ -1.24
CCDC33-209ENST00000560565 MRPL37Q9BZE1 423 aaKnown RBP7.33□□□□□ -1.24
CCDC33-209ENST00000560565 LIN7CQ9NUP9 197 aaKnown RBP7.33□□□□□ -1.24
CCDC33-209ENST00000560565 PLEK2Q9NYT0 353 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 PRSS50Q9UI38 385 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 ST3GAL6Q9Y274 331 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 URGCP-MRPS24S4R325 110 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 SHANK1Q9Y566 2161 aa7.33□□□□□ -1.24
CCDC33-209ENST00000560565 NCOA6Q14686 2063 aaPredicted RBP7.32□□□□□ -1.24
CCDC33-209ENST00000560565 ARHGAP21Q5T5U3 1957 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 TRBV6-6A0A0A6YYG2 114 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 IGKV1D-43A0A0B4J1Z2 117 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 A0A1W2PP11 408 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 MAP1LC3B2A6NCE7 125 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 NKX2-6A6NCS4 301 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 H3BML4 177 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 DEGS1O15121 323 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 ADAM20O43506 726 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 PDE6DO43924 150 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 GZMBP10144 247 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 CCL3P10147 92 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 FAHP16930 419 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 SRD5A2P31213 254 aa7.32□□□□□ -1.24
CCDC33-209ENST00000560565 RBM11P57052 281 aaKnown RBP7.32□□□□□ -1.24
CCDC33-209ENST00000560565 MEF2BQ02080 365 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms