RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 C14orf166Q9Y224 244 aaKnown RBP9.69□□□□□ -0.86
LDLR-212ENST00000560467 KBTBD11-OT1A0A1B0GTJ5 212 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 FOXH1O75593 365 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 HBZP02008 142 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 TCRBP04435 133 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 LIPFP07098 398 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 SCTP09683 121 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 PGAM2P15259 253 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 GATA3P23771 443 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 FPR2P25090 351 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 RBMXP38159 391 aaKnown RBP9.68□□□□□ -0.86
LDLR-212ENST00000560467 CEACAM6P40199 344 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 HTD2P86397 168 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 HMGN3Q15651 99 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 ABCA11PQ4W5N1 156 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 WDR25Q64LD2 544 aaPredicted RBP9.68□□□□□ -0.86
LDLR-212ENST00000560467 DHRS11Q6UWP2 260 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 CCBE1Q6UXH8 406 aaPredicted RBP9.68□□□□□ -0.86
LDLR-212ENST00000560467 TREML4Q6UXN2 200 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 BTN2A1Q7KYR7 527 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 BCL6BQ8N143 479 aaPredicted RBP9.68□□□□□ -0.86
LDLR-212ENST00000560467 TPRX1Q8N7U7 411 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 DUSP18Q8NEJ0 188 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 EDARADDQ8WWZ3 215 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 DACT3Q96B18 629 aaPredicted RBP9.68□□□□□ -0.86
LDLR-212ENST00000560467 DMRTB1Q96MA1 342 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 ZNF714Q96N38 554 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 UNKLQ9H9P5 680 aaKnown RBP9.68□□□□□ -0.86
LDLR-212ENST00000560467 SLC2A8Q9NY64 477 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 CALYQ9NYX4 217 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 NOTCH1P46531 2555 aa9.68□□□□□ -0.86
LDLR-212ENST00000560467 TRAV39A0A0B4J263 110 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 PPIAL4CA0A0B4J2A2 164 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 C12orf77C9JDV5 145 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 SLC22A5O76082 557 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 H2AFB2P0C5Z0 115 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 ZNF728P0DKX0 622 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 PPIAL4GP0DN37 164 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 SELLP14151 372 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 PRTN3P24158 256 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 CCR6P51684 374 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 TAS2R31P59538 309 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 OXA1LQ15070 435 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 SURF2Q15527 256 aaPredicted RBP9.67□□□□□ -0.86
LDLR-212ENST00000560467 TUSC1Q2TAM9 212 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 MIDNQ504T8 468 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 IGSF11Q5DX21 431 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 TMEM200BQ69YZ2 307 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 FAAP20Q6NZ36 180 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 BTNL3Q6UXE8 466 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 RBMS3Q6XE24 437 aaKnown RBP9.67□□□□□ -0.86
LDLR-212ENST00000560467 CMTM1Q8IZ96 169 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 CENPSQ8N2Z9 138 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 OR13A1Q8NGR1 328 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 RFESDQ8TAC1 157 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 DCTN5Q9BTE1 182 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 GPN1Q9HCN4 374 aaPredicted RBP9.67□□□□□ -0.86
LDLR-212ENST00000560467 MMP26Q9NRE1 261 aa9.67□□□□□ -0.86
LDLR-212ENST00000560467 PRKDCP78527 4128 aaKnown RBP9.66□□□□□ -0.86
LDLR-212ENST00000560467 TRBV6-7A0A0A0MS04 114 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 NPIPB11E5RHQ5 1161 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 INMT-MINDY4F8WBC2 141 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 ENSAO43768 121 aaKnown RBP9.66□□□□□ -0.86
LDLR-212ENST00000560467 NDUFB6O95139 128 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 NFYBP25208 207 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 LUMP51884 338 aaPredicted RBP9.66□□□□□ -0.86
LDLR-212ENST00000560467 KLF17Q5JT82 389 aaPredicted RBP9.66□□□□□ -0.86
LDLR-212ENST00000560467 SLC38A6Q8IZM9 456 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 OR2AK2Q8NG84 335 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 OR4D10Q8NGI6 311 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 OR52M1Q8NGK5 317 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 OR1L1Q8NH94 360 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 ZNF48Q96MX3 618 aaPredicted RBP9.66□□□□□ -0.86
LDLR-212ENST00000560467 GHITMQ9H3K2 345 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 C19orf12Q9NSK7 152 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 NUDT15Q9NV35 164 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 IDI2-AS1Q9NZ38 188 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 CTSZQ9UBR2 303 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 JPT1Q9UK76 154 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 OR2W1Q9Y3N9 320 aa9.66□□□□□ -0.86
LDLR-212ENST00000560467 TRAV6A0A075B6T7 132 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 IGKV1D-8A0A087WSZ0 117 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 PIGBOS1A0A0B4J2F0 54 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 A0A1B0GW55 424 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 TOR1AO14656 332 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 PRAF2O60831 178 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 RBP4P02753 201 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 DUX4L2P0CJ85 424 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 DUX4L3P0CJ86 424 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 DUX4L4P0CJ87 422 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 DUX4L5P0CJ88 424 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 DUX4L6P0CJ89 424 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 DUX4L7P0CJ90 424 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 NFYAP23511 347 aaPredicted RBP9.65□□□□□ -0.86
LDLR-212ENST00000560467 RAB7AP51149 207 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 RAG2P55895 527 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 FXYD4P59646 89 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 BAMBIQ13145 260 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 LTC4SQ16873 150 aa9.65□□□□□ -0.86
LDLR-212ENST00000560467 PLA1AQ53H76 456 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms