RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 FAM71F2Q6NXP2 309 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 WNT16Q9UBV4 365 aa16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 MRPS17Q9Y2R5 130 aaKnown RBP16.42■□□□□ 0.22
SEMA4B-215ENST00000560089 ADAM20O43506 726 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 GPR75O95800 540 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 CMPK1P30085 196 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 GNRHRP30968 328 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 ARG2P78540 354 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 GJE1A6NN92 205 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 H3BP45 60 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 RBFOX2O43251 390 aaKnown RBP eCLIP16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 ZP4Q12836 540 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 CCDC71LQ8N9Z2 235 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 ST6GALNAC3Q8NDV1 305 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 ASB10Q8WXI3 467 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 SIGLEC12Q96PQ1 595 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 RTN4RQ9BZR6 473 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 PLEKHJ1Q9NW61 149 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 ZDBF2Q9HCK1 2354 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 DOCK11Q5JSL3 2073 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 PMCHP20382 165 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 RRADP55042 308 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 FMODQ06828 376 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 ACSF3Q4G176 576 aaPredicted RBP16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 ZNF695Q8IW36 515 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 UEVLDQ8IX04 471 aa16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 PHF3Q92576 2039 aaKnown RBP16.41■□□□□ 0.22
SEMA4B-215ENST00000560089 BDP1A6H8Y1 2624 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 A0A1B0GV72 72 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 G3V4G9 280 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 TMEM267Q0VDI3 215 aaPredicted RBP16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 DGAT2L6Q6ZPD8 337 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 CPT1CQ8TCG5 803 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 ABHD14BQ96IU4 210 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 POLR1DQ9Y2S0 133 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 G3V3Y1 287 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 CTSEP14091 401 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 PEBP1P30086 187 aaKnown RBP16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 OPRM1P35372 400 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 Q0VG73 95 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 C1QL2Q7Z5L3 287 aa16.4■□□□□ 0.22
SEMA4B-215ENST00000560089 C3orf85A0A1B0GTC6 90 aa16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 HMGB3O15347 200 aaKnown RBP16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 C3orf79P0CE67 100 aa16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 ZNF133P52736 654 aaPredicted RBP16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 POU3F1Q03052 451 aaPredicted RBP16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 TCF24Q7RTU0 167 aa16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 SPAG17Q6Q759 2223 aa16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 PRR19A6NJB7 356 aa16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 FER1L6-AS1Q8NA97 138 aa16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 OR1N2Q8NGR9 330 aa16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 PSMG3Q9BT73 122 aaPredicted RBP16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 UBE2J1Q9Y385 318 aaPredicted RBP16.39■□□□□ 0.21
SEMA4B-215ENST00000560089 A0A1W2PPC4 97 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 MLNRO43193 412 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 GFRA1P56159 465 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 CLDN15P56746 228 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 ABHD12BQ7Z5M8 362 aaPredicted RBP16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 VASH2Q86V25 355 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 GATAD1Q8WUU5 269 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 RAB11FIP5Q9BXF6 653 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 RAB29O14966 203 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 NPBWR2P48146 333 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 PRRX1P54821 245 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 MPV17L2Q567V2 206 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 STUMQ69YW2 141 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 LRFN3Q9BTN0 628 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 SIT1Q9Y3P8 196 aa16.38■□□□□ 0.21
SEMA4B-215ENST00000560089 C1QTNF9BB2RNN3 333 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 FOXS1O43638 330 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 TNFSF15O95150 251 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 IGLV3-19P01714 112 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 SERF2P84101 59 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 PSG9Q00887 426 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 CBLN3Q6UW01 205 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 HOXB13Q92826 284 aaPredicted RBP16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 NEIL1Q96FI4 390 aaPredicted RBP16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 LIN37Q96GY3 246 aaPredicted RBP16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 SMPXQ9UHP9 88 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 RAMP3O60896 148 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 ID3Q02535 119 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 FIGLAQ6QHK4 219 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 OR10G6Q8NH81 332 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 WASHC3Q9Y3C0 194 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 CFAP54Q96N23 3096 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 C1QTNF9P0C862 333 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 PAX9P55771 341 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 RNF133Q8WVZ7 376 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 TMEM222Q9H0R3 208 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 TXNIPQ9H3M7 391 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 HS3ST3A1Q9Y663 406 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 SPACA6W5XKT8 324 aa16.37■□□□□ 0.21
SEMA4B-215ENST00000560089 NCOR1O75376 2440 aa16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 SPTY2D1-AS1A0A0U1RR47 76 aa16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 ZNF524Q96C55 264 aa16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 KLHDC7BQ96G42 594 aa16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 GNB4Q9HAV0 340 aa16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 HEBP2Q9Y5Z4 205 aa16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 FCN1O00602 326 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms